CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf653
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000016563
T104960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.793
0.939
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000020736
C2H2 ZF
476
501
FHCPYEGCSQVYVAVSSFQNHVNLVH
ENSORLP00000020736
C2H2 ZF
507
531
KVCPHPGCGKKFYLSNHLHRHMIIH
ENSORLP00000020736
C2H2 ZF
537
559
FICETCGKSFKRKNHLEVHRRTH
ENSORLP00000020736
C2H2 ZF
565
587
LQCEICGYQCRQRASLNWHMKKH
ENSORLP00000020736
C2H2 ZF
595
618
FTCEFCDKRFEKLDSVKFHKLKSH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy