ENSORLG00000017089 (Oryzias latipes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSORLG00000017089 T104965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM6
M08277_2.00
Homo sapiens
TTTTYYWBHHTTTYYHYTBYN

NRVARDRRAAADDVWRRAAAA
ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME
0.818 0.978
PRDM6
M08855_2.00
Homo sapiens
NNKTTTTCYYBYB

VRVRRGAAAAMNN
Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C
0.818 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000021378 C2H2 ZF 91 111
ENSORLP00000021378 C2H2 ZF 119 141
ENSORLP00000021378 C2H2 ZF 147 169
ENSORLP00000021378 C2H2 ZF 175 196

Links

Other C2H2 ZF family TFs
Other Oryzias latipes TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30209.m001510 Ricinus communis 30209.m001510 N 0.000
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.000
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.000
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.000
Bo1g117640 Brassica oleracea Bo1g117640 N 0.000
Bra037587 Brassica rapa Bra037587 N 0.000
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.000
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.000
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.000
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.000
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.000
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.000
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.000
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.000
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.000
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.000
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.000
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.000
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.000
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.000
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.000
MDP0000268133 Malus domestica MDP0000268133 N 0.000
MDP0000315095 Malus domestica MDP0000315095 N 0.000
mgf014854m Mimulus guttatus mgf014854m N 0.000
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.000
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.000
OBART06G15310 Oryza barthii OBART06G15310 N 0.000
OLONG_009303 Oryza longistaminata OLONG_009303 N 0.000
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.000
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.000
OPUNC06G13910 Oryza punctata OPUNC06G13910 N 0.000
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.000
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.000
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.000
OS06G0485100 Oryza sativa OS06G0485100 N 0.000
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.000
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.000
PK03811.1 Cannabis sativa PK03811.1 N 0.000
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.000
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.000
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.000
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.000
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.000
Si030167m.g Setaria italica Si030167m.g N 0.000
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.000
TCM_046875 Theobroma cacao TCM_046875 N 0.000
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.000
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.000
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.000