CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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plag1
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000019433
T104990_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PLAG1
M06465_2.00
Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG
B1H
Mathelier et al.(2014)
MA0163.1
0.774
0.863
PLAG1
M10286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_01
0.774
0.863
PLAG1
M10287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_02
0.774
0.863
PLAG1
M10288_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_08
0.774
0.863
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000024190
C2H2 ZF
38
60
FLCPECQKSFNSLEKLKVHSYSH
ENSORLP00000024190
C2H2 ZF
66
90
YRCSQPDCTKAFVSKYKLLRHMATH
ENSORLP00000024190
C2H2 ZF
96
118
HKCSYCEKMFHRKDHLKNHLHTH
ENSORLP00000024190
C2H2 ZF
125
147
FTCRECGKSYNTKLGFKRHIALH
ENSORLP00000024190
C2H2 ZF
154
176
LTCQVCLQQFPSTGVLLEHLKTH
ENSORLP00000024190
C2H2 ZF
189
211
HCCEHCERCFYTRKDVRRHMVVH
ENSORLP00000024190
C2H2 ZF
217
240
FLCQYCAQRFGRKDHLTRHVKKSH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy