ZKSCAN1 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000005258 T105739_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN

NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.827 1.000
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.827 1.000
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH

DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.825 0.993
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000004877 C2H2 ZF 377 399
ENSPCAP00000004877 C2H2 ZF 405 427
ENSPCAP00000004877 C2H2 ZF 433 455
ENSPCAP00000004877 C2H2 ZF 461 483
ENSPCAP00000004877 C2H2 ZF 489 511
ENSPCAP00000004877 C2H2 ZF 517 539

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDOA005556 Musca domestica MDOA005556 I 0.000
LCUP011237 Lucilia cuprina LCUP011237 I 0.000
TC008433 Tribolium castaneum TC008433 I 0.000
AEPI000454 Anopheles epiroticus AEPI000454 N 0.000
AFAF016022 Anopheles farauti AFAF016022 N 0.000
AFUN011482 Anopheles funestus AFUN011482 N 0.000
AMAM014999 Anopheles maculatus AMAM014999 N 0.000
AMEC019303 Anopheles melas AMEC019303 N 0.000
AMEM003072 Anopheles merus AMEM003072 N 0.000
AMIN005829 Anopheles minimus AMIN005829 N 0.000
AQUA002447 Anopheles quadriannulatus AQUA002447 N 0.000
ADIR000927 Anopheles dirus ADIR000927 N 0.000
ACUA018382 Anopheles culicifacies ACUA018382 N 0.000
AARA002562 Anopheles arabiensis AARA002562 N 0.000
AAEL008346 Aedes aegypti AAEL008346 N 0.000
AAEL008350 Aedes aegypti AAEL008350 N 0.000
AGAP000876 Anopheles gambiae AGAP000876 N 0.000
BGIBMGA001001 Bombyx mori BGIBMGA001001 N 0.000
CPIJ018670 Culex quinquefasciatus CPIJ018670 N 0.000
HMEL006591 Heliconius melpomene HMEL006591 N 0.000
KGM_17269 Danaus plexippus KGM_17269 N 0.000
AALB006841 Anopheles albimanus AALB006841 N 0.000
CpipJ_CPIJ018670 Culex pipiens CpipJ_CPIJ018670 N 0.000