CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF660
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000009482
T105830_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF660
M04479_2.00
Homo sapiens
VHTGATDVYCCAHCCTRH
DYAGGDTGGRBHATCADB
SELEX
Yin et al.(2017)
ZNF660_FL_HT-SELEX
0.768
0.926
ZNF660
M04480_2.00
Homo sapiens
VHTGATDVCCCAHCCTRH
DYAGGDTGGGBHATCADB
SELEX
Yin et al.(2017)
ZNF660_FL_Methyl-HT-SELEX
0.768
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000008794
C2H2 ZF
50
72
YVCNECGKAFSQSANLMVHERIH
ENSPCAP00000008794
C2H2 ZF
78
100
YKCRGCGKAFSHSSNLVVHRRIH
ENSPCAP00000008794
C2H2 ZF
106
128
YTCSECGKSFSGKSHLTRHQGIH
ENSPCAP00000008794
C2H2 ZF
134
156
HTCKECGKAFSRSSGLISHHTVH
ENSPCAP00000008794
C2H2 ZF
162
184
YTCVECGKAFSRSSNLTQHQRMH
ENSPCAP00000008794
C2H2 ZF
190
212
FTCKECGKTCGSNMKILDHQRIH
ENSPCAP00000008794
C2H2 ZF
218
240
YECDECGKAFILRKTLNEHQRLH
ENSPCAP00000008794
C2H2 ZF
246
268
YKCNECRKAFTSNRNLIDHQRVH
ENSPCAP00000008794
C2H2 ZF
274
296
YKCNECGKTFRQTSQVILHLRTH
ENSPCAP00000008794
C2H2 ZF
302
324
YKCSECGKAYRYSSQLIQHQRKH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF660
Echinops telfairi
ENSETEG00000006785
I
0.787
ENSSTOG00000022981
Ictidomys tridecemlineatus
ENSSTOG00000022981
I
0.776
ZNF660
Otolemur garnettii
ENSOGAG00000006766
I
0.776
ENSTSYG00000012687
Tarsius syrichta
ENSTSYG00000012687
I
0.775
ZNF660
Pan troglodytes
ENSPTRG00000014821
I
0.772
ENSNLEG00000018537
Nomascus leucogenys
ENSNLEG00000018537
I
0.772
ZNF660
Tursiops truncatus
ENSTTRG00000006735
I
0.771
ZNF660
Callithrix jacchus
ENSCJAG00000021827
I
0.771
ENSCSAG00000018659
Chlorocebus sabaeus
ENSCSAG00000018659
I
0.771
ENSMMUP00000039067
Macaca fascicularis
ENSMMUP00000039067
I
0.771
ZNF660
Macaca mulatta
ENSMMUG00000031704
I
0.771
ENSOARG00000014056
Ovis aries
ENSOARG00000014056
I
0.769
ZNF660
Homo sapiens
ENSG00000144792
D
0.768
ZNF660
Pteropus vampyrus
ENSPVAG00000015833
I
0.768
ZNF660
Oryctolagus cuniculus
ENSOCUG00000028986
I
0.767
ZNF660
Felis catus
ENSFCAG00000029935
I
0.767
ENSAMEG00000018703
Ailuropoda melanoleuca
ENSAMEG00000018703
I
0.763