CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF200
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000015754
T105989_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF200
M00218_2.00
Homo sapiens
NRTMTCCNNN
NNNGGAKAYN
PBM
Barrera et al.(2016)
ZNF200_REF
0.778
0.965
ZNF200
M08273_2.00
Homo sapiens
RCTTCCGSBNBV
BVNVSCGGAAGY
ChIP-seq
Schmitges et al.(2016)
P98182_2-5.RCADE
0.778
0.965
ZNF200
M08232_2.00
Homo sapiens
AYTTCC
GGAART
ChIP-seq
Najafabadi et al.(2015b)
ZNF200
0.778
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000014699
C2H2 ZF
252
274
YTCPLCGKQFNESSYLISHQRTH
ENSPCAP00000014699
C2H2 ZF
280
302
YDCSHCGKSFNHKTNLNKHERIH
ENSPCAP00000014699
C2H2 ZF
308
330
YSCSQCGKNFRQNSHRSRHEGIH
ENSPCAP00000014699
C2H2 ZF
336
358
FKCPECGKTFSGNVEFVLHLQSH
ENSPCAP00000014699
C2H2 ZF
364
386
YGCKKCGRRFGRLSNCTRHEKTH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy