CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF248
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000016125
T106000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF248
M07739_2.00
Homo sapiens
NYNTYVMTGRAYATDGKHHDY
RHDDMCHATRTYCAKBRANRN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF248.RCADE.OriginalMapping
0.812
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000015048
C2H2 ZF
366
388
FECGECGKMFWEKSNLTQHQRTH
ENSPCAP00000015048
C2H2 ZF
394
416
YECIECGKAFCQKPHLTNHQRTH
ENSPCAP00000015048
C2H2 ZF
422
444
YECKQCGKTFCVKSNLTEHQRTH
ENSPCAP00000015048
C2H2 ZF
450
472
YDCNVCGKSFCHRSALTVHQRTH
ENSPCAP00000015048
C2H2 ZF
478
500
FICNECGKSFCVKSNLIVHQRTH
ENSPCAP00000015048
C2H2 ZF
506
528
YKCSECGKTFCEKSALTKHQRTH
ENSPCAP00000015048
C2H2 ZF
534
556
YECHECGKTFSQRSVLTKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy