CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000000918
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000000918
T106055_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM6
M08277_2.00
Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA
ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME
0.818
0.978
PRDM6
M08855_2.00
Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN
Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C
0.818
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000000903
C2H2 ZF
494
514
WKCGQCFKTFTQRILLQMHVC
ENSPFOP00000000903
C2H2 ZF
522
544
YQCGHCSQSFSQPSELRNHVVTH
ENSPFOP00000000903
C2H2 ZF
550
572
FKCGYCGRAFAGATTLNNHIRTH
ENSPFOP00000022062
C2H2 ZF
470
490
WKCGQCFKTFTQRILLQMHVC
ENSPFOP00000022062
C2H2 ZF
498
520
YQCGHCSQSFSQPSELRNHVVTH
ENSPFOP00000022062
C2H2 ZF
526
548
FKCGYCGRAFAGATTLNNHIRTH
ENSPFOP00000022062
C2H2 ZF
554
575
FKCERCDRSFTQATQLSRHQRL
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy