CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000001566
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000001566
T106072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SP8
M02898_2.00
Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB
SELEX
Jolma et al.(2013)
SP8_1
0.801
0.913
SP8
M04517_2.00
Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN
SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX
0.801
0.913
SP9
M04645_2.00
Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB
SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX
0.801
0.913
SP8
M04518_2.00
Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY
SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX
0.801
0.913
SP9
M04646_2.00
Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY
SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX
0.801
0.913
Sp1
M03682_2.00
Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND
SELEX
Nitta et al.(2015)
Sp1_1
0.787
0.899
Sp1
M06117_2.00
Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH
B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378
0.787
0.899
Sp1
M06118_2.00
Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN
B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378
0.787
0.899
Sp4
M01862_2.00
Mus musculus
NMCGCCCMY
RKGGGCGKN
PBM
Weirauch et al.(2014)
pTH4998
0.771
0.884
Sp4
M00133_2.00
Mus musculus
HMCGCCCMYN
NRKGGGCGKD
PBM
Badis et al.(2009)
Sp4_1011
0.771
0.884
SP4
M02879_2.00
Homo sapiens
NWRGCCACGCCCMCHYN
NRDGKGGGCGTGGCYWN
SELEX
Jolma et al.(2013)
SP4_1
0.771
0.884
Sp4
M05859_2.00
Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH
SMiLE-seq
Isakova et al.(2017)
SP4
0.771
0.884
SP4
M08296_2.00
Homo sapiens
NNVGCYCCKCCYMYH
DRKRGGMGGRGCBNN
ChIP-seq
Schmitges et al.(2016)
Q02446.MEME
0.771
0.884
SP4
M08873_2.00
Homo sapiens
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A
0.771
0.884
Sp4
M08975_2.00
Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B
0.771
0.884
SP4
M10165_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q3
0.771
0.884
SP4
M10166_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q5
0.771
0.884
Sp5
M09016_2.00
Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG
Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C
0.771
0.870
SP5
M10319_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP5_Q2
0.771
0.870
Sp7
M09009_2.00
Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB
Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A
0.771
0.884
SP7
M10258_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSX_Q3
0.771
0.884
Spps
M06159_2.00
Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM
B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169
0.765
0.826
Spps
M06160_2.00
Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV
B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169
0.765
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000001484
C2H2 ZF
273
297
HSCHIPGCGKVYGKTSHLKAHLRWH
ENSPFOP00000001484
C2H2 ZF
303
327
FVCNWLFCGKRFTRSDELQRHVRTH
ENSPFOP00000001484
C2H2 ZF
333
355
FECPMCQKRFMRSDHLSKHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
496 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy