CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000003059
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000003059
T106101_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
egrh-1
M00622_2.00
Caenorhabditis elegans
CSCCCMCR
YGKGGGSG
PBM
Narasimhan et al.(2015)
pTH9317
0.780
0.768
EGR4
M02889_2.00
Homo sapiens
NHMCGCCCACGCAHHN
NDDTGCGTGGGCGKDN
SELEX
Jolma et al.(2013)
EGR4_1
0.777
0.768
EGR4
M02890_2.00
Homo sapiens
NHMCGCCCACGCAHWH
DWDTGCGTGGGCGKDN
SELEX
Jolma et al.(2013)
EGR4_2
0.777
0.768
EGR4
M04461_2.00
Homo sapiens
HMCGCCCACGCAH
DTGCGTGGGCGKD
SELEX
Yin et al.(2017)
EGR4_eDBD_HT-SELEX
0.777
0.768
EGR4
M10216_2.00
Homo sapiens
MCRCCCACGCAW
WTGCGTGGGYGK
Transfac
Matys et al.(2006)
V$NGFIC_01
0.777
0.768
EGR4
M04462_2.00
Homo sapiens
HMCGCCCMCGCRH
DYGCGKGGGCGKD
SELEX
Yin et al.(2017)
EGR4_eDBD_Methyl-HT-SELEX
0.777
0.768
sr
M06072_2.00
Drosophila melanogaster
HVMCGCCCMCVYMH
DKRBGKGGGCGKBD
B1H
Zhu et al.(2011)
sr_SANGER_5_FBgn0003499
0.776
0.768
sr
M06073_2.00
Drosophila melanogaster
NNMCRCCCMCVHNN
NNDBGKGGGYGKNN
B1H
Zhu et al.(2011)
sr_SOLEXA_5_FBgn0003499
0.776
0.768
EGR2
M00233_2.00
Homo sapiens
HDCCCMCDBN
NVHGKGGGHD
PBM
Barrera et al.(2016)
EGR2_REF
0.774
0.768
Egr2
M00778_2.00
Mus musculus
YRCCCMCGYN
NRCGKGGGYR
PBM
Weirauch et al.(2013)
pTH3091
0.774
0.768
EGR2
M02885_2.00
Homo sapiens
MCGCCCACGCD
HGCGTGGGCGK
SELEX
Jolma et al.(2013)
EGR2_1
0.774
0.768
EGR2
M02886_2.00
Homo sapiens
NNMCGCCCACGCDNN
NNHGCGTGGGCGKNN
SELEX
Jolma et al.(2013)
EGR2_2
0.774
0.768
EGR2
M04439_2.00
Homo sapiens
HMCRCCCACGCNN
NNGCGTGGGYGKD
SELEX
Yin et al.(2017)
EGR2_FL_HT-SELEX
0.774
0.768
EGR2
M08302_2.00
Homo sapiens
CDCCCMCDC
GHGKGGGHG
ChIP-seq
Schmitges et al.(2016)
P11161_1-3.RCADE
0.774
0.768
EGR2
M08884_2.00
Homo sapiens
YYCCDCCCMCDCHYHYHY
RDRDRDGHGKGGGHGGRR
Misc
Kulakovskiy et al.(2013)
EGR2_HUMAN.H11MO.0.A
0.774
0.768
Egr2
M08994_2.00
Mus musculus
BHYCCDCCCMCDCN
NGHGKGGGHGGRDV
Misc
Kulakovskiy et al.(2013)
EGR2_MOUSE.H11MO.0.A
0.774
0.768
Egr2
M09515_2.00
Mus musculus
NMCRCCCACDSN
NSHGTGGGYGKN
Misc
Heinz et al.(2010)
Thymocytes-Egr2_GSE34254
0.774
0.768
EGR2
M10197_2.00
Homo sapiens
MCGCCYACGCAH
DTGCGTRGGCGK
Transfac
Matys et al.(2006)
V$EGR2_01
0.774
0.768
EGR2
M10198_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR2_Q4
0.774
0.768
EGR2
M10199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EGR2_Q6
0.774
0.768
EGR2
M04440_2.00
Homo sapiens
NMCGCCCACRCRN
NYGYGTGGGCGKN
SELEX
Yin et al.(2017)
EGR2_FL_Methyl-HT-SELEX
0.774
0.768
EGR2
M00232_2.00
Homo sapiens
NHMCGCCYNN
NNRGGCGKDN
PBM
Barrera et al.(2016)
EGR2_R409W
0.772
0.754
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000002918
C2H2 ZF
288
312
FPCSVQGCERRFSRSDELNRHVRIH
ENSPFOP00000002918
C2H2 ZF
318
340
FQCTICARSFSRSDHLTTHTRTH
ENSPFOP00000002918
C2H2 ZF
346
368
FSCDVCGKRFARSDERKRHGRVH
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy