CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000008911
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000008911
T106232_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.816
0.925
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.816
0.925
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.816
0.925
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.816
0.925
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.816
0.925
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.816
0.925
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.816
0.925
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.814
0.925
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.765
0.820
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.765
0.820
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.765
0.820
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.765
0.820
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000009078
C2H2 ZF
235
259
FRCEYEGCGKLYTTAHHLKVHERSH
ENSPFOP00000009078
C2H2 ZF
265
289
YVCEYRGCGKKFATGYGLKSHSRTH
ENSPFOP00000009078
C2H2 ZF
295
319
YRCQEMNCCKSFKTSGDLQKHTRTH
ENSPFOP00000009078
C2H2 ZF
325
349
FKCPVEGCGRSFTTSNIRKVHIRTH
ENSPFOP00000009078
C2H2 ZF
355
379
YYCSEPSCGRSFASATNYKNHMRIH
ENSPFOP00000009078
C2H2 ZF
385
409
YVCTVPGCEKRFTEYSSLYKHHVVH
ENSPFOP00000009078
C2H2 ZF
415
438
YNCNHCGKTYKQISTLAMHKRTTH
ENSPFOP00000024090
C2H2 ZF
170
194
FRCEYEGCGKLYTTAHHLKVHERSH
ENSPFOP00000024090
C2H2 ZF
200
224
YVCEYRGCGKKFATGYGLKSHSRTH
ENSPFOP00000024090
C2H2 ZF
230
254
YRCQEMNCCKSFKTSGDLQKHTRTH
ENSPFOP00000024090
C2H2 ZF
260
284
FKCPVEGCGRSFTTSNIRKVHIRTH
ENSPFOP00000024090
C2H2 ZF
290
314
YYCSEPSCGRSFASATNYKNHMRIH
ENSPFOP00000024090
C2H2 ZF
320
344
YVCTVPGCEKRFTEYSSLYKHHVVH
ENSPFOP00000024090
C2H2 ZF
350
373
YNCNHCGKTYKQISTLAMHKRTTH
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy