CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSPFOG00000010341
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000010341
T106265_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.772
0.921
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.772
0.921
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.772
0.921
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000010558
C2H2 ZF
87
108
YRCEDCDELFSSTLELRRHQKY
ENSPFOP00000010558
C2H2 ZF
136
158
HECKDCEKIFPNEYSLGQHMIVH
ENSPFOP00000010558
C2H2 ZF
164
186
YKCDQCPKAFNWKSNLIRHQMSH
ENSPFOP00000010558
C2H2 ZF
192
215
FECENCDKVFTDPSNLQRHIRSQH
ENSPFOP00000010558
C2H2 ZF
221
243
HTCPECGKTFATSSGLKQHKHIH
ENSPFOP00000010558
C2H2 ZF
249
271
FICEVCHKSYTQFSNLCRHKRMH
ENSPFOP00000010558
C2H2 ZF
278
299
IKCKDCGQLFSTTSSLNKHRRF
ENSPFOP00000010558
C2H2 ZF
854
876
YACRYCGKIFPRSANLTRHLRTH
ENSPFOP00000010558
C2H2 ZF
882
905
YRCKYCDRSFSISSNLQRHVRNIH
ENSPFOP00000010558
C2H2 ZF
911
933
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy