CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000011742
(
Poecilia formosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPFOG00000011742
T106289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF276
M04495_2.00
Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN
SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX
0.778
0.895
ZNF276
M04496_2.00
Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS
SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX
0.778
0.895
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000011780
C2H2 ZF
380
405
YKCPYQGCTAVYRAPDGLKKHIKEHH
ENSPFOP00000011780
C2H2 ZF
412
436
PCPHPGCNKVFMIDRYLQRHIKLIH
ENSPFOP00000011780
C2H2 ZF
442
464
YICDQCGQTFKQRKHLSVHQMRH
ENSPFOP00000011780
C2H2 ZF
470
492
LQCEVCGFQCRQRASLKYHMTKH
ENSPFOP00000011780
C2H2 ZF
500
523
FECRTCRKRFEKPHNLNVHMSMVH
Links
Other
C2H2 ZF
family TFs
Other
Poecilia formosa
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy