CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ENSPPYG00000001486
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000001486
T106751_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF684
M08240_2.00
Homo sapiens
ACAGTCCACCCCTT
AAGGGGTGGACTGT
ChIP-seq
Najafabadi et al.(2015b)
ZNF684
0.813
0.983
ZNF684
M04428_2.00
Homo sapiens
NBACAGTCCACCCCTTDV
BHAAGGGGTGGACTGTVN
SELEX
Yin et al.(2017)
ZNF684_FL_HT-SELEX
0.813
0.983
ZNF684
M07574_2.00
Homo sapiens
CWCCCCTTK
MAAGGGGWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF684.RCADE.ReprocessedData
0.813
0.983
ZNF684
M08297_2.00
Homo sapiens
ACAGTCCACCCCTTB
VAAGGGGTGGACTGT
ChIP-seq
Schmitges et al.(2016)
Q5T5D7.MEME
0.813
0.983
ZNF684
M04429_2.00
Homo sapiens
DBACAGTCCACCCCTTDR
YHAAGGGGTGGACTGTVH
SELEX
Yin et al.(2017)
ZNF684_FL_Methyl-HT-SELEX
0.813
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000001718
C2H2 ZF
159
181
YECTECGKAFKKKFHFIRHEKNH
ENSPPYP00000001718
C2H2 ZF
187
209
FECNDCGKAYSRKAHLVTHQKIH
ENSPPYP00000001718
C2H2 ZF
215
237
FVCNDCGKAFMHKAQLVVHQRLH
ENSPPYP00000001718
C2H2 ZF
243
265
YECSQCGKTFTWNSSFNQHVKSH
ENSPPYP00000001718
C2H2 ZF
271
293
FECKECGKTFRYSSSLYKHSRFH
ENSPPYP00000001718
C2H2 ZF
299
321
YQCIICGKAFGNTSVLVTHQRIH
ENSPPYP00000001718
C2H2 ZF
328
349
GCIECGKAFIKKSHLLRHQITH
ENSPPYP00000001718
C2H2 ZF
355
377
YECNRCGKAFSQKSNLIVHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy