CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000016371
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000016371
T107174_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN3
M02923_2.00
Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA
SELEX
Jolma et al.(2013)
ZNF306_1
0.827
1.000
ZKSCAN3
M07696_2.00
Homo sapiens
GGCTAGMCC
GGKCTAGCC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000018301
C2H2 ZF
314
336
HICHECGKSFAQSSGLSKHRRIH
ENSPPYP00000018301
C2H2 ZF
342
364
YECEECGKAFIGSSALVIHQRVH
ENSPPYP00000018301
C2H2 ZF
370
392
YECEECGKAFSHSSDLIKHQRTH
ENSPPYP00000018301
C2H2 ZF
398
420
YECDDCGKTFSQSCSLLEHHRIH
ENSPPYP00000018301
C2H2 ZF
426
448
YQCSMCGKAFRRSSHLLRHQRIH
ENSPPYP00000018301
C2H2 ZF
480
502
YKCNECERSFTQNTGLIEHQKIH
ENSPPYP00000018301
C2H2 ZF
508
530
YQCNACGKGFTRISYLVQHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy