ENSPPYG00000018996 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000018996 T107250_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.827 1.000
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.827 1.000
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.827 1.000
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.827 1.000
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000021302 C2H2 ZF 194 216
ENSPPYP00000021302 C2H2 ZF 222 244
ENSPPYP00000021302 C2H2 ZF 250 272
ENSPPYP00000021302 C2H2 ZF 278 300
ENSPPYP00000021302 C2H2 ZF 306 328
ENSPPYP00000021302 C2H2 ZF 334 356
ENSPPYP00000021302 C2H2 ZF 362 384
ENSPPYP00000021302 C2H2 ZF 390 412
ENSPPYP00000021302 C2H2 ZF 418 440
ENSPPYP00000021302 C2H2 ZF 446 468
ENSPPYP00000021302 C2H2 ZF 474 496
ENSPPYP00000021302 C2H2 ZF 502 524
ENSPPYP00000021302 C2H2 ZF 530 552

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action