CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSPPYG00000029879
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000029879
T107339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN9
M04465_2.00
Homo sapiens
NKGVTTCTTATCTTATCMYH
DRKGATAAGATAAGAABCMN
SELEX
Yin et al.(2017)
ZSCAN9_eDBD_HT-SELEX
0.827
0.991
ZSCAN9
M04466_2.00
Homo sapiens
NKGVTTCTTATCTTATCCYY
RRGGATAAGATAAGAABCMN
SELEX
Yin et al.(2017)
ZSCAN9_eDBD_Methyl-HT-SELEX
0.827
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000023640
C2H2 ZF
114
136
HKCDECGKSFTQSSGLIRHQRIH
ENSPPYP00000023640
C2H2 ZF
142
164
YECNECGKAFSRSSGLFNHRGIH
ENSPPYP00000023640
C2H2 ZF
170
192
YHCKECGKAFSQSAGLIQHQRIH
ENSPPYP00000023640
C2H2 ZF
198
220
YQCSQCSKSYSRRSFLIEHQRSH
ENSPPYP00000023640
C2H2 ZF
226
248
HQCIECGKSFNRHCNLIRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSNLEG00000004504
Nomascus leucogenys
ENSNLEG00000004504
I
0.827
ENSP00000404074
Macaca fascicularis
ENSP00000404074
I
0.827
ZSCAN9
Homo sapiens
ENSG00000137185
D
0.827
ZSCAN9
Macaca mulatta
ENSMMUG00000002537
I
0.827
ZSCAN9
Pan troglodytes
ENSPTRG00000017870
I
0.825
ZSCAN9
Equus caballus
ENSECAG00000015075
I
0.825
ENSPANG00000013432
Papio anubis
ENSPANG00000013432
I
0.819
ZSCAN9
Callithrix jacchus
ENSCJAG00000018658
I
0.818
ZSCAN9
Gorilla gorilla
ENSGGOG00000000688
I
0.811
ENSTSYG00000006203
Tarsius syrichta
ENSTSYG00000006203
I
0.806
ZSCAN9
Sus scrofa
ENSSSCG00000001203
I
0.798
ZSCAN9
Tursiops truncatus
ENSTTRG00000013203
I
0.790
ZSCAN9
Microcebus murinus
ENSMICG00000010443
I
0.767
ZSCAN9
Bos taurus
ENSBTAG00000040168
I
0.767