CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000004093
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000004093
T107469_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.823
0.982
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.823
0.982
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.823
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000004358
C2H2 ZF
117
138
FRCEDCDELFQSKLDLRRHKKY
ENSPSIP00000004358
C2H2 ZF
165
187
YECKDCERMFPNKYSLEQHMIIH
ENSPSIP00000004358
C2H2 ZF
193
215
YKCDQCPKAFNWKSNLIRHQMSH
ENSPSIP00000004358
C2H2 ZF
221
244
FECENCVKVFTDPSNLQRHIRSQH
ENSPSIP00000004358
C2H2 ZF
250
272
HACPDCGKTFATSSGLKQHKHIH
ENSPSIP00000004358
C2H2 ZF
278
300
FICEVCHKSYTQFSNLCRHKRMH
ENSPSIP00000004358
C2H2 ZF
307
328
IKCKDCGQMFSTTSSLNKHRRF
ENSPSIP00000004358
C2H2 ZF
832
854
YTCRYCGKIFPRSANLTRHLRTH
ENSPSIP00000004358
C2H2 ZF
860
883
YRCKYCDRSFSISSNLQRHVRNIH
ENSPSIP00000004358
C2H2 ZF
889
911
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy