ENSPSIG00000005687 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000005687 T107519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mtf1
M00136_2.00 		Mus musculus
CGTGYGCAM
KTGCRCACG		 PBM
Badis et al.(2009)
Mtf1_2377 		0.819 0.986
MTF1
M02922_2.00 		Homo sapiens
GTGCCGTGTGCAAA
TTTGCACACGGCAC		 SELEX
Jolma et al.(2013)
MTF1_1 		0.819 0.986
MTF1
M04617_2.00 		Homo sapiens
NDNDYCGTGTGCAAARN
NYTTTGCACACGRHNHN		 SELEX
Yin et al.(2017)
MTF1_eDBD_HT-SELEX 		0.819 0.986
MTF1
M08942_2.00 		Homo sapiens
MGKVHCGTGYGCADMDB
VHKHTGCRCACGDBMCK		 Misc
Kulakovskiy et al.(2013)
MTF1_HUMAN.H11MO.0.C 		0.819 0.986
Mtf1
M08981_2.00 		Mus musculus
MGKVHCGTGYGCADMDB
VHKHTGCRCACGDBMCK		 Misc
Kulakovskiy et al.(2013)
MTF1_MOUSE.H11MO.0.C 		0.819 0.986
MTF1
M10308_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MTF1_01 		0.819 0.986
MTF1
M10309_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MTF1_02 		0.819 0.986
MTF1
M10310_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MTF1_Q4 		0.819 0.986
MTF1
M10311_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MTF1_Q5 		0.819 0.986
MTF1
M04618_2.00 		Homo sapiens
NRNRCCGTGTGCAAARV
BYTTTGCACACGGYNYN		 SELEX
Yin et al.(2017)
MTF1_eDBD_Methyl-HT-SELEX 		0.819 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000006186 C2H2 ZF 141 165
ENSPSIP00000006186 C2H2 ZF 171 195
ENSPSIP00000006186 C2H2 ZF 201 225
ENSPSIP00000006186 C2H2 ZF 230 254
ENSPSIP00000006186 C2H2 ZF 260 284
ENSPSIP00000006186 C2H2 ZF 290 314
ENSPSIP00000006190 C2H2 ZF 141 165
ENSPSIP00000006190 C2H2 ZF 171 195
ENSPSIP00000006190 C2H2 ZF 201 225
ENSPSIP00000006190 C2H2 ZF 230 254
ENSPSIP00000006190 C2H2 ZF 260 284
ENSPSIP00000006190 C2H2 ZF 290 314

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

Invalid Input OrderBy

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action