CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000009066
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000009066
T107608_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000009980
C2H2 ZF
370
392
HKCKFCGKVFGNDSALQIHLRSH
ENSPSIP00000009980
C2H2 ZF
398
420
YKCNICGNRFTTKGNLKVHFQRH
ENSPSIP00000009980
C2H2 ZF
599
621
FKCKICGRAFSTKGNLKTHYGVH
ENSPSIP00000009980
C2H2 ZF
631
653
HSCPICQKKFTNAVVLQQHIRMH
ENSPSIP00000009980
C2H2 ZF
924
946
HICTTCGKNFSSASALQIHERTH
ENSPSIP00000009980
C2H2 ZF
952
974
FACTICGRAFTTKGNLKVHVGTH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001716.1
Alligator sinensis
Alligator_sinensis_CCG001716.1
N
0.827
SALL4
Monodelphis domestica
ENSMODG00000016387
N
0.827
Gfo_R009587
Geospiza fortis
Gfo_R009587
N
0.827
ENSFALG00000013149
Ficedula albicollis
ENSFALG00000013149
N
0.827
ENSGALG00000007834
Gallus gallus
ENSGALG00000007834
N
0.827
ENSAPLG00000006498
Anas platyrhynchos
ENSAPLG00000006498
N
0.827
Cmyd_10017461
Chelonia mydas
Cmyd_10017461
N
0.827
ENSSHAG00000018013
Sarcophilus harrisii
ENSSHAG00000018013
N
0.825
Pvit_03345
Pogona vitticeps
Pvit_03345
N
0.817
SALL4
Anolis carolinensis
ENSACAG00000012748
N
0.814
sall3a
Takifugu rubripes
ENSTRUG00000017423
N
0.811
ENSAMXG00000011111
Astyanax mexicanus
ENSAMXG00000011111
N
0.809
ENSONIG00000013791
Oreochromis niloticus
ENSONIG00000013791
N
0.802
sall3.S
Xenopus laevis
XB-GENE-17340458
N
0.800
ENSMEUG00000005793
Macropus eugenii
ENSMEUG00000005793
N
0.798
sall3b
Gasterosteus aculeatus
ENSGACG00000002533
N
0.798
ENSAMXG00000001254
Astyanax mexicanus
ENSAMXG00000001254
N
0.792
SALL4
Ornithorhynchus anatinus
ENSOANG00000008667
N
0.790
BAA85900
Xenopus laevis
BAA85900
N
0.787
sall4
Xenopus tropicalis
XB-GENE-485252
N
0.787
ENSGMOG00000013383
Gadus morhua
ENSGMOG00000013383
N
0.777
sall4.L
Xenopus laevis
XB-GENE-485256
N
0.774
sall3b
Oryzias latipes
ENSORLG00000008882
N
0.773
ENSPFOG00000013292
Poecilia formosa
ENSPFOG00000013292
N
0.756
ENSXMAG00000000798
Xiphophorus maculatus
ENSXMAG00000000798
N
0.756