ENSPSIG00000009089 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000009089 T107609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZIC5
M04471_2.00 		Homo sapiens
NKACCCCCCGCTGHGH
DCDCAGCGGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC5_eDBD_HT-SELEX 		0.823 0.973
ZIC5
M04472_2.00 		Homo sapiens
NKACCCCCYGCTGTGM
KCACAGCRGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC5_eDBD_Methyl-HT-SELEX 		0.823 0.973
Zic5
M00780_2.00 		Mus musculus
BRCCCCCYDS
SHRGGGGGYV		 PBM
Weirauch et al.(2013)
pTH2818 		0.813 0.964
Zic3
M00151_2.00 		Mus musculus
NCMYVBNRNB
VNYNVBRKGN		 PBM
Badis et al.(2009)
Zic3_3119 		0.767 0.891
ZIC3
M02894_2.00 		Homo sapiens
BACCCCCYGCKGYGH
DCRCMGCRGGGGGTV		 SELEX
Jolma et al.(2013)
ZIC3_1 		0.767 0.891
Zic3
M02936_2.00 		Mus musculus
KRCCCCCYGCTGYGH
DCRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
Zic3_1 		0.767 0.891
ZIC3
M04491_2.00 		Homo sapiens
VGACCCCCYGCTGTGM
KCACAGCRGGGGGTCB		 SELEX
Yin et al.(2017)
ZIC3_eDBD_HT-SELEX 		0.767 0.891
ZIC3
M04493_2.00 		Homo sapiens
BACCCCCYGCTGYGH
DCRCAGCRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC3_FL_HT-SELEX 		0.767 0.891
ZIC3
M08902_2.00 		Homo sapiens
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN		 Misc
Kulakovskiy et al.(2013)
ZIC3_HUMAN.H11MO.0.B 		0.767 0.891
Zic3
M09013_2.00 		Mus musculus
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN		 Misc
Kulakovskiy et al.(2013)
ZIC3_MOUSE.H11MO.0.A 		0.767 0.891
ZIC3
M10229_2.00 		Homo sapiens
VRBCMCCCN
NGGGKGVYB		 Transfac
Matys et al.(2006)
V$ZIC3_01 		0.767 0.891
Zic3
M10359_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC3_07 		0.767 0.891
ZIC3
M04492_2.00 		Homo sapiens
NKACCCCCTGCTGTGM
KCACAGCAGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC3_eDBD_Methyl-HT-SELEX 		0.767 0.891
ZIC3
M04494_2.00 		Homo sapiens
BRCCCCCTGCTGTGM
KCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC3_FL_Methyl-HT-SELEX 		0.767 0.891
Zic1
M00137_2.00 		Mus musculus
NCMYVBNGNK
MNCNVBRKGN		 PBM
Badis et al.(2009)
Zic1_0991 		0.760 0.909
ZIC1
M02893_2.00 		Homo sapiens
KRCCCCCYGCTGYG
CRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
ZIC1_1 		0.760 0.909
ZIC1
M04485_2.00 		Homo sapiens
BVCCMCCYGYHGYGH
DCRCDRCRGGKGGBV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_HT-SELEX 		0.760 0.909
ZIC1
M04487_2.00 		Homo sapiens
BVCCCCCYGCTGYGH
DCRCAGCRGGGGGBV		 SELEX
Yin et al.(2017)
ZIC1_FL_HT-SELEX 		0.760 0.909
ZIC1
M08900_2.00 		Homo sapiens
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_HUMAN.H11MO.0.B 		0.760 0.909
Zic1
M08990_2.00 		Mus musculus
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_MOUSE.H11MO.0.B 		0.760 0.909
ZIC1
M10226_2.00 		Homo sapiens
KRCNMMCYV
BRGKKNGTM		 Transfac
Matys et al.(2006)
V$ZIC1_01 		0.760 0.909
ZIC1
M10227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC1_Q2 		0.760 0.909
ZIC1
M04486_2.00 		Homo sapiens
BACCCCCYRCTGTGM
KCACAGYRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_Methyl-HT-SELEX 		0.760 0.909
ZIC1
M04488_2.00 		Homo sapiens
BRCCCCCTGCTGTGH
DCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC1_FL_Methyl-HT-SELEX 		0.760 0.909
Zic2
M00150_2.00 		Mus musculus
NCMYVYNRNN
NNYNRBRKGN		 PBM
Badis et al.(2009)
Zic2_2895 		0.756 0.900
Zic2
M09011_2.00 		Mus musculus
NRMYHCCTGCTGDGH
DCHCAGCAGGDRKYN		 Misc
Kulakovskiy et al.(2013)
ZIC2_MOUSE.H11MO.0.C 		0.756 0.900
ZIC2
M10107_2.00 		Homo sapiens
VACCMCCCH
DGGGKGGTB		 Transfac
Matys et al.(2006)
V$ZIC2_01 		0.756 0.900
ZIC2
M08233_2.00 		Homo sapiens
BBCCTGCWGNB
VNCWGCAGGVV		 ChIP-seq
Najafabadi et al.(2015b)
ZIC2 		0.756 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000010007 C2H2 ZF 38 56
ENSPSIP00000010007 C2H2 ZF 65 92
ENSPSIP00000010007 C2H2 ZF 98 122
ENSPSIP00000010007 C2H2 ZF 128 152
ENSPSIP00000010007 C2H2 ZF 158 182

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZIC5 Monodelphis domestica ENSMODG00000007733 I 0.825
ENSMEUG00000004592 Macropus eugenii ENSMEUG00000004592 I 0.825
ENSPTRG00000034285 Pan troglodytes ENSPTRG00000034285 I 0.823
ENSCSAG00000017495 Chlorocebus sabaeus ENSCSAG00000017495 I 0.823
ZIC5 Canis familiaris ENSCAFG00000005834 I 0.823
ENSCJAG00000020987 Callithrix jacchus ENSCJAG00000020987 I 0.823
ENSPANG00000018055 Papio anubis ENSPANG00000018055 I 0.823
Zic5 Rattus norvegicus ENSRNOG00000014358 I 0.823
ENSOARG00000004385 Ovis aries ENSOARG00000004385 I 0.823
ZIC5 Homo sapiens ENSG00000139800 D 0.823
ZIC5 Gorilla gorilla ENSGGOG00000022385 I 0.823
ZIC5 Macaca mulatta ENSMMUG00000014821 I 0.823
ENSNLEG00000007807 Nomascus leucogenys ENSNLEG00000007807 I 0.823
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I 0.823
ZIC5 Dasypus novemcinctus ENSDNOG00000046390 I 0.823
ZIC5 Procavia capensis ENSPCAG00000011845 I 0.823
ENSAMEG00000004500 Ailuropoda melanoleuca ENSAMEG00000004500 I 0.823
ZIC5 Erinaceus europaeus ENSEEUG00000002965 I 0.822
ENSLOCG00000003087 Lepisosteus oculatus ENSLOCG00000003087 I 0.821
ENSAMXG00000002323 Astyanax mexicanus ENSAMXG00000002323 I 0.821
zic5 Xenopus tropicalis XB-GENE-480775 I 0.817
zic5 Oryzias latipes ENSORLG00000011124 I 0.816
ENSONIG00000006787 Oreochromis niloticus ENSONIG00000006787 I 0.816
ENSPFOG00000012158 Poecilia formosa ENSPFOG00000012158 I 0.816
ENSXMAG00000010996 Xiphophorus maculatus ENSXMAG00000010996 I 0.816
zic5 Danio rerio ENSDARG00000016022 I 0.812
Pvit_14046 Pogona vitticeps Pvit_14046 I 0.810
zic5 Tetraodon nigroviridis ENSTNIG00000014980 I 0.806
zic5 Takifugu rubripes ENSTRUG00000011797 I 0.806
zic5.S Xenopus laevis XB-GENE-865408 I 0.804
CGI_10016116 Crassostrea gigas CGI_10016116 I 0.790
ENSECAG00000013406 Equus caballus ENSECAG00000013406 I 0.786
CapteG160442 Capitella teleta CapteG160442 I 0.770
zic1 Oryzias latipes ENSORLG00000010050 I 0.769
ENSNLEG00000003005 Nomascus leucogenys ENSNLEG00000003005 I 0.767
ENSMPUG00000001786 Mustela putorius furo ENSMPUG00000001786 I 0.767
zic1.S Xenopus laevis XB-GENE-864815 I 0.767
ENSMICG00000010339 Microcebus murinus ENSMICG00000010339 I 0.767
ZIC3 Myotis lucifugus ENSMLUG00000011691 I 0.767
ZIC3 Loxodonta africana ENSLAFG00000007048 I 0.767
Zic3 Mus musculus ENSMUSG00000067860 D 0.767
Myotis_brandtii_ZIC3_10005513 Myotis brandtii Myotis_brandtii_ZIC3_10005513 I 0.767
ZIC3 Pteropus vampyrus ENSPVAG00000011652 I 0.767
ENSPPYG00000020775 Pongo abelii ENSPPYG00000020775 I 0.767
ENSTSYG00000003356 Tarsius syrichta ENSTSYG00000003356 I 0.767
Zic3 Rattus norvegicus ENSRNOG00000000861 I 0.767
ENSSTOG00000024153 Ictidomys tridecemlineatus ENSSTOG00000024153 I 0.767
ZIC3 Sus scrofa ENSSSCG00000012705 I 0.767
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I 0.767
ZIC3 Gorilla gorilla ENSGGOG00000011914 I 0.767
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I 0.767
ZIC3 Otolemur garnettii ENSOGAG00000011700 I 0.767
ENSPANG00000011357 Papio anubis ENSPANG00000011357 I 0.767
ENSP00000287538 Macaca fascicularis ENSP00000287538 I 0.767
ENSP00000287538-D1 Bos grunniens ENSP00000287538-D1 I 0.767
ENSOARG00000010774 Ovis aries ENSOARG00000010774 I 0.767
ZIC3 Oryctolagus cuniculus ENSOCUG00000009358 I 0.767
ZIC3 Bos taurus ENSBTAG00000021413 I 0.767
ZIC3 Echinops telfairi ENSETEG00000018846 I 0.767
ENSCSAG00000007453 Chlorocebus sabaeus ENSCSAG00000007453 I 0.767
ENSAMEG00000002684 Ailuropoda melanoleuca ENSAMEG00000002684 I 0.767
ZIC3 Canis familiaris ENSCAFG00000018979 I 0.767
ZIC3 Homo sapiens ENSG00000156925 D 0.767
ZIC3 Dasypus novemcinctus ENSDNOG00000006192 I 0.767
ENSDORG00000014318 Dipodomys ordii ENSDORG00000014318 I 0.767
ZIC3 Callithrix jacchus ENSCJAG00000013792 I 0.767
ZIC3 Felis catus ENSFCAG00000025684 I 0.767
ENSCPOG00000002374 Cavia porcellus ENSCPOG00000002374 I 0.767
ZIC3 Equus caballus ENSECAG00000013318 I 0.767
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I 0.766
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I 0.766
ENSAPLG00000003027 Anas platyrhynchos ENSAPLG00000003027 I 0.764
SMAR005380 Strigamia maritima SMAR005380 I 0.764
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I 0.764
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I 0.764
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I 0.764
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I 0.762
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I 0.762
Ogr15027 Ophisaurus gracilis Ogr15027 I 0.762
zic2b Tetraodon nigroviridis ENSTNIG00000014979 I 0.762
Pvit_01478 Pogona vitticeps Pvit_01478 I 0.762
zic4.L Xenopus laevis XB-GENE-1033019 I 0.762
ZIC4 Otolemur garnettii ENSOGAG00000007463 I 0.762
SPU_030070 Strongylocentrotus purpuratus SPU_030070 I 0.762
SPU_028583 Strongylocentrotus purpuratus SPU_028583 I 0.762
LotgiG193238 Lottia gigantea LotgiG193238 I 0.762
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I 0.762
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I 0.762
zic4 Xenopus tropicalis XB-GENE-1033015 I 0.762
zic3 Danio rerio ENSDARG00000071497 I 0.761
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I 0.760
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I 0.760
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I 0.760
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I 0.760
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I 0.760
Aan_R013349 Calypte anna Aan_R013349 I 0.760
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I 0.760
ZIC1 Pan troglodytes ENSPTRG00000015501 I 0.760
ZIC1 Callithrix jacchus ENSCJAG00000001524 I 0.760
ZIC1 Sus scrofa ENSSSCG00000011692 I 0.760
ENSP00000282928 Macaca fascicularis ENSP00000282928 I 0.760
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I 0.760
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I 0.760
zic1 Danio rerio ENSDARG00000015567 I 0.760
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I 0.760
ZIC1 Tursiops truncatus ENSTTRG00000014350 I 0.760
ZIC1 Homo sapiens ENSG00000152977 D 0.760
ZIC1 Bos taurus ENSBTAG00000014751 I 0.760
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I 0.760
ZIC1 Loxodonta africana ENSLAFG00000030632 I 0.760
ZIC1 Microcebus murinus ENSMICG00000014401 I 0.760
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I 0.760
ENSGMOG00000019585 Gadus morhua ENSGMOG00000019585 I 0.760
zic1 Takifugu rubripes ENSTRUG00000017760 I 0.760
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I 0.760
XP_002937379 Xenopus tropicalis XP_002937379 I 0.760
ZIC1 Gorilla gorilla ENSGGOG00000001101 I 0.760
ZIC1 Anolis carolinensis ENSACAG00000006947 I 0.760
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I 0.760
zic1 Gasterosteus aculeatus ENSGACG00000003678 I 0.760
ZIC1 Felis catus ENSFCAG00000007061 I 0.760
ZIC1 Macaca mulatta ENSMMUG00000004742 I 0.760
Zic1 Rattus norvegicus ENSRNOG00000014644 I 0.760
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I 0.760
Gfo_R005436 Geospiza fortis Gfo_R005436 I 0.760
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I 0.760
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I 0.760
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I 0.760
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I 0.760
Pvit_01479 Pogona vitticeps Pvit_01479 I 0.760
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I 0.760
Ogr15030 Ophisaurus gracilis Ogr15030 I 0.760
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I 0.760
ZIC1 Otolemur garnettii ENSOGAG00000007465 I 0.760
Zic1 Mus musculus ENSMUSG00000032368 D 0.760
ENSXMAG00000013404 Xiphophorus maculatus ENSXMAG00000013404 I 0.759
ENSONIG00000002716 Oreochromis niloticus ENSONIG00000002716 I 0.759
ENSPFOG00000012982 Poecilia formosa ENSPFOG00000012982 I 0.759
zic3 Oryzias latipes ENSORLG00000001654 I 0.759
Alligator_sinensis_CCG018453.1 Alligator sinensis Alligator_sinensis_CCG018453.1 I 0.758
ENSFALG00000004344 Ficedula albicollis ENSFALG00000004344 I 0.758
ZIC3 Sorex araneus ENSSARG00000012492 I 0.758
ENSONIG00000006788 Oreochromis niloticus ENSONIG00000006788 I 0.758
Gfo_R015355 Geospiza fortis Gfo_R015355 I 0.758
zic2b Oryzias latipes ENSORLG00000011117 I 0.758
Aan_R005804 Calypte anna Aan_R005804 I 0.758
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I 0.758
ENSAPLG00000010556 Anas platyrhynchos ENSAPLG00000010556 I 0.757
zic3.S Xenopus laevis XB-GENE-865376 I 0.757
zic3 Xenopus tropicalis XB-GENE-480431 I 0.757
ENSXMAG00000009164 Xiphophorus maculatus ENSXMAG00000009164 I 0.757
Aan_R004772 Calypte anna Aan_R004772 I 0.757
L798_08424 Zootermopsis nevadensis L798_08424 I 0.757
Alligator_sinensis_CCG005717.1 Alligator sinensis Alligator_sinensis_CCG005717.1 I 0.757
PHUM303860 Pediculus humanus PHUM303860 I 0.757
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I 0.757
zic4 Takifugu rubripes ENSTRUG00000017765 I 0.757
ENSPSIG00000011896 Pelodiscus sinensis ENSPSIG00000011896 I 0.757
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I 0.757
zic4 Oryzias latipes ENSORLG00000010055 I 0.757
zic4 Danio rerio ENSDARG00000031307 I 0.757
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I 0.757
ENSFALG00000003772 Ficedula albicollis ENSFALG00000003772 I 0.757
Zic4 Mus musculus ENSMUSG00000036972 I 0.757
ENSGALG00000006497 Gallus gallus ENSGALG00000006497 I 0.757
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I 0.757
ENSMEUG00000014290 Macropus eugenii ENSMEUG00000014290 I 0.757
ZIC3 Monodelphis domestica ENSMODG00000014029 I 0.757
zic4 Gasterosteus aculeatus ENSGACG00000003685 I 0.757
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I 0.757
Zic4 Rattus norvegicus ENSRNOG00000014871 I 0.757
zic1 Tetraodon nigroviridis ENSTNIG00000012758 I 0.757
ZIC3 Taeniopygia guttata ENSTGUG00000002155 I 0.757
ZIC2 Macaca mulatta ENSMMUG00000014822 I 0.756
ENSAMEG00000004503 Ailuropoda melanoleuca ENSAMEG00000004503 I 0.756
ZIC2 Bos taurus ENSBTAG00000025246 I 0.756
ENSMPUG00000011375 Mustela putorius furo ENSMPUG00000011375 I 0.756
Zic2 Mus musculus ENSMUSG00000061524 D 0.756
ZIC2 Canis familiaris ENSCAFG00000005835 I 0.756
ZIC2 Myotis lucifugus ENSMLUG00000003412 I 0.756
ZIC2 Microcebus murinus ENSMICG00000015310 I 0.756
ZIC2 Tursiops truncatus ENSTTRG00000002568 I 0.756
ZIC2 Loxodonta africana ENSLAFG00000008431 I 0.756
ZIC2 Homo sapiens ENSG00000043355 D 0.756
ENSFCAG00000030117 Felis catus ENSFCAG00000030117 I 0.756
ENSSTOG00000023178 Ictidomys tridecemlineatus ENSSTOG00000023178 I 0.756
ZIC2 Gorilla gorilla ENSGGOG00000006512 I 0.756
Myotis_brandtii_PCCA_10007322 Myotis brandtii Myotis_brandtii_PCCA_10007322 I 0.756
ENSPANG00000007601 Papio anubis ENSPANG00000007601 I 0.756
Zic2 Rattus norvegicus ENSRNOG00000054879 I 0.756
ENSCSAG00000017494 Chlorocebus sabaeus ENSCSAG00000017494 I 0.756
ZIC2 Callithrix jacchus ENSCJAG00000020988 I 0.756
ZIC2 Cavia porcellus ENSCPOG00000026926 I 0.756
ENSPPYG00000005472 Pongo abelii ENSPPYG00000005472 I 0.756
ZIC2 Dasypus novemcinctus ENSDNOG00000043170 I 0.756
ENSBTAP00000035289-D2 Bos grunniens ENSBTAP00000035289-D2 I 0.756
ENSNLEG00000007808 Nomascus leucogenys ENSNLEG00000007808 I 0.756
ZIC2 Echinops telfairi ENSETEG00000007329 I 0.756
ZIC2 Erinaceus europaeus ENSEEUG00000013747 I 0.756
ZIC2 Equus caballus ENSECAG00000018593 I 0.756
ZIC2 Sus scrofa ENSSSCG00000009520 I 0.756
ZIC2 Otolemur garnettii ENSOGAG00000025901 I 0.756
ZIC2 Pan troglodytes ENSPTRG00000006000 I 0.756