ENSPSIG00000011562 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000011562 T107652_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.825 0.993
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.825 0.993
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000012875 C2H2 ZF 1 23
ENSPSIP00000012875 C2H2 ZF 65 86
ENSPSIP00000012875 C2H2 ZF 92 114
ENSPSIP00000012875 C2H2 ZF 122 145
ENSPSIP00000012875 C2H2 ZF 151 173
ENSPSIP00000012875 C2H2 ZF 205 227
ENSPSIP00000012877 C2H2 ZF 1 23
ENSPSIP00000012877 C2H2 ZF 65 86
ENSPSIP00000012877 C2H2 ZF 92 114
ENSPSIP00000012877 C2H2 ZF 122 145
ENSPSIP00000012877 C2H2 ZF 151 173

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.827
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.827
Afo_R009044 Aptenodytes forsteri Afo_R009044 I 0.827
Alligator_sinensis_CCG014139.1 Alligator sinensis Alligator_sinensis_CCG014139.1 N 0.827
Ogr03452 Ophisaurus gracilis Ogr03452 N 0.827
ENSMPUG00000012814 Mustela putorius furo ENSMPUG00000012814 N 0.827
Patz1 Mus musculus ENSMUSG00000020453 I 0.827
Patz1 Rattus norvegicus ENSRNOG00000018709 N 0.827
ENSPSIG00000016553 Pelodiscus sinensis ENSPSIG00000016553 I 0.827
PATZ1 Sus scrofa ENSSSCG00000010027 N 0.827
PATZ1 Taeniopygia guttata ENSTGUG00000009749 N 0.827
Aan_R008287 Calypte anna Aan_R008287 I 0.827
Tal_R008892 Tyto alba Tal_R008892 I 0.827
Pvit_03702 Pogona vitticeps Pvit_03702 I 0.827
PATZ1 Equus caballus ENSECAG00000025030 N 0.827
ENSAPLG00000003934 Anas platyrhynchos ENSAPLG00000003934 I 0.827
ENSCSAG00000008746 Chlorocebus sabaeus ENSCSAG00000008746 N 0.827
Gfo_R010882 Geospiza fortis Gfo_R010882 I 0.827
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.827
ENSFALG00000007450 Ficedula albicollis ENSFALG00000007450 I 0.827
Brh_R010628 Buceros rhinoceros Brh_R010628 I 0.827
PATZ1 Felis catus ENSFCAG00000030253 N 0.827
Cmyd_10005165 Chelonia mydas Cmyd_10005165 N 0.827
PATZ1 Homo sapiens ENSG00000100105 D 0.827
PATZ1 Pteropus vampyrus ENSPVAG00000001749 I 0.825
ENSP00000266269-D1 Bos grunniens ENSP00000266269-D1 I 0.825
PATZ1 Pan troglodytes ENSPTRG00000014268 I 0.825
PATZ1 Tursiops truncatus ENSTTRG00000010279 I 0.825
ENSP00000266269 Macaca fascicularis ENSP00000266269 I 0.825
ENSSTOG00000020707 Ictidomys tridecemlineatus ENSSTOG00000020707 I 0.825
ENSNLEG00000004385 Nomascus leucogenys ENSNLEG00000004385 I 0.825
PATZ1 Gorilla gorilla ENSGGOG00000017171 I 0.825
PATZ1 Meleagris gallopavo ENSMGAG00000008439 I 0.825
PATZ1 Gallus gallus ENSGALG00000006934 I 0.825
PATZ1 Dasypus novemcinctus ENSDNOG00000003183 I 0.825
PATZ1 Bos taurus ENSBTAG00000005478 I 0.825
PATZ1 Cavia porcellus ENSCPOG00000010787 I 0.825
PATZ1 Microcebus murinus ENSMICG00000005430 I 0.825
Myotis_brandtii_PATZ1_10027570 Myotis brandtii Myotis_brandtii_PATZ1_10027570 I 0.825
PATZ1 Otolemur garnettii ENSOGAG00000027905 I 0.825
PATZ1 Ochotona princeps ENSOPRG00000002286 N 0.825
PATZ1 Oryctolagus cuniculus ENSOCUG00000002323 N 0.825
ENSAMEG00000007074 Ailuropoda melanoleuca ENSAMEG00000007074 I 0.825
PATZ1 Ornithorhynchus anatinus ENSOANG00000014654 I 0.825
ENSPPYG00000011732 Pongo abelii ENSPPYG00000011732 I 0.825
ENSOARG00000010061 Ovis aries ENSOARG00000010061 N 0.818
PATZ1 Loxodonta africana ENSLAFG00000002317 I 0.802
ENSLACG00000016839 Latimeria chalumnae ENSLACG00000016839 I 0.791
ENSMEUG00000016293 Macropus eugenii ENSMEUG00000016293 I 0.787