ENSPSIG00000013071 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000013071 T107676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN

NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.812 0.896
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM

KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.803 0.878
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN

NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.803 0.878
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN

NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.803 0.878
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN

NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.803 0.878
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN

NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.803 0.878
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000014651 C2H2 ZF 427 449
ENSPSIP00000014651 C2H2 ZF 455 477
ENSPSIP00000014651 C2H2 ZF 483 505
ENSPSIP00000014651 C2H2 ZF 511 533
ENSPSIP00000014651 C2H2 ZF 539 562
ENSPSIP00000014663 C2H2 ZF 327 349
ENSPSIP00000014663 C2H2 ZF 355 377
ENSPSIP00000014663 C2H2 ZF 383 405
ENSPSIP00000014663 C2H2 ZF 411 433
ENSPSIP00000014663 C2H2 ZF 439 462

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bcl6b Mus musculus ENSMUSG00000000317 D 0.812
BCL6B Ochotona princeps ENSOPRG00000006070 I 0.812
Bcl6b Rattus norvegicus ENSRNOG00000059956 I 0.812
BCL6B Canis familiaris ENSCAFG00000015968 I 0.805
ENSMEUG00000000375 Macropus eugenii ENSMEUG00000000375 I 0.804
ENSSHAG00000000166 Sarcophilus harrisii ENSSHAG00000000166 I 0.804
BCL6B Procavia capensis ENSPCAG00000013548 I 0.803
ENSPANG00000024201 Papio anubis ENSPANG00000024201 I 0.803
ENSP00000293805 Macaca fascicularis ENSP00000293805 I 0.803
Myotis_brandtii_BCL6B_10021005 Myotis brandtii Myotis_brandtii_BCL6B_10021005 I 0.803
ENSPPYG00000007891 Pongo abelii ENSPPYG00000007891 I 0.803
ENSP00000293805-D1 Bos grunniens ENSP00000293805-D1 I 0.803
ENSAMEG00000016319 Ailuropoda melanoleuca ENSAMEG00000016319 I 0.803
ENSSTOG00000006365 Ictidomys tridecemlineatus ENSSTOG00000006365 I 0.803
BCL6B Pan troglodytes ENSPTRG00000008656 I 0.803
BCL6B Tupaia belangeri ENSTBEG00000005792 I 0.803
BCL6B Sus scrofa ENSSSCG00000017927 I 0.803
BCL6B Otolemur garnettii ENSOGAG00000027908 I 0.803
Bcl6b Dipodomys ordii ENSDORG00000005538 I 0.803
BCL6B Equus caballus ENSECAG00000023771 I 0.803
BCL6B Dasypus novemcinctus ENSDNOG00000035586 I 0.803
ENSCSAG00000012171 Chlorocebus sabaeus ENSCSAG00000012171 I 0.803
BCL6B Bos taurus ENSBTAG00000020854 I 0.803
BCL6B Cavia porcellus ENSCPOG00000004066 I 0.803
BCL6B Gorilla gorilla ENSGGOG00000009787 I 0.803
BCL6B Homo sapiens ENSG00000161940 D 0.803
BCL6B Loxodonta africana ENSLAFG00000006642 I 0.803
ENSNLEG00000009340 Nomascus leucogenys ENSNLEG00000009340 I 0.803
ENSMPUG00000010670 Mustela putorius furo ENSMPUG00000010670 I 0.803
BCL6B Macaca mulatta ENSMMUG00000016268 I 0.803
ENSMLUG00000003564 Myotis lucifugus ENSMLUG00000003564 I 0.803
BCL6B Monodelphis domestica ENSMODG00000006161 I 0.802
ENSOARG00000009610 Ovis aries ENSOARG00000009610 I 0.801
bcl6ab Tetraodon nigroviridis ENSTNIG00000007834 I 0.799
bcl6ab Takifugu rubripes ENSTRUG00000001788 I 0.799
Alligator_sinensis_CCG005035.1 Alligator sinensis Alligator_sinensis_CCG005035.1 I 0.791
BCL6B Tursiops truncatus ENSTTRG00000003982 I 0.790
bcl6ab Oryzias latipes ENSORLG00000004563 I 0.790