ENSPSIG00000013514 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000013514 T107685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF704
M04519_2.00
Homo sapiens
HRCCGGCCGGYD

HRCCGGCCGGYD
SELEX
Yin et al.(2017)
ZNF704_FL_HT-SELEX
0.827 1.000
ZNF704
M04520_2.00
Homo sapiens
NRCCGGCCGGYN

NRCCGGCCGGYN
SELEX
Yin et al.(2017)
ZNF704_FL_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000015132 C2H2 ZF 120 145
ENSPSIP00000015144 C2H2 ZF 195 220

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30116.m000393 Ricinus communis 30116.m000393 N 0.000
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N 0.000
BGIOSGA009119 Oryza indica BGIOSGA009119 N 0.000
BRADI3G57700 Brachypodium distachyon BRADI3G57700 N 0.000
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N 0.000
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N 0.000
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N 0.000
Cla002005 Citrullus lanatus Cla002005 N 0.000
Cucsa.239250 Cucumis sativus Cucsa.239250 N 0.000
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N 0.000
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N 0.000
F775_20121 Aegilops tauschii F775_20121 N 0.000
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N 0.000
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N 0.000
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N 0.000
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N 0.000
LPERR02G27910 Leersia perrieri LPERR02G27910 N 0.000
MDP0000597087 Malus domestica MDP0000597087 N 0.000
MDP0000634922 Malus domestica MDP0000634922 N 0.000
mgf000387m Mimulus guttatus mgf000387m N 0.000
mgf013454m Mimulus guttatus mgf013454m N 0.000
MLOC_54605 Hordeum vulgare MLOC_54605 N 0.000
OB02G40920 Oryza brachyantha OB02G40920 N 0.000
OB07G29110 Oryza brachyantha OB07G29110 N 0.000
OBART02G34050 Oryza barthii OBART02G34050 N 0.000
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I 0.000
OLONG_015646 Oryza longistaminata OLONG_015646 N 0.000
OMERI02G32400 Oryza meridionalis OMERI02G32400 I 0.000
ONIVA02G36110 Oryza nivara ONIVA02G36110 I 0.000
OPUNC02G31450 Oryza punctata OPUNC02G31450 N 0.000
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N 0.000
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N 0.000
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N 0.000
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I 0.000
OS02G0770600 Oryza sativa OS02G0770600 N 0.000
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N 0.000
Pavir.J01310 Panicum virgatum Pavir.J01310 N 0.000
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N 0.000
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N 0.000
PK04394.1 Cannabis sativa PK04394.1 N 0.000
PK16821.1 Cannabis sativa PK16821.1 N 0.000
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N 0.000
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N 0.000
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N 0.000
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N 0.000
SapurV1A.0869s0080 Salix purpurea SapurV1A.0869s0080 N 0.000
Si017699m.g Setaria italica Si017699m.g N 0.000
TCM_006422 Theobroma cacao TCM_006422 N 0.000
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N 0.000
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N 0.000
TRIUR3_20834 Triticum urartu TRIUR3_20834 N 0.000
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N 0.000
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N 0.000