ZBTB18 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000002175 T107801_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN

NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827 1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827 1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827 1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG

CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827 1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB

VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827 1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV

BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827 1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM

KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827 1.000
ZBTB18
M10283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827 1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN

NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000003681 C2H2 ZF 379 401
ENSPTRP00000003681 C2H2 ZF 420 441
ENSPTRP00000003681 C2H2 ZF 447 469
ENSPTRP00000003681 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

Invalid Input OrderBy

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action