BCL6B (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000008656 T107895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM

KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.827 1.000
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN

NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.827 1.000
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN

NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.827 1.000
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN

NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.827 1.000
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN

NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.827 1.000
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN

NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.818 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000014769 C2H2 ZF 328 350
ENSPTRP00000014769 C2H2 ZF 356 378
ENSPTRP00000014769 C2H2 ZF 384 406
ENSPTRP00000014769 C2H2 ZF 412 434
ENSPTRP00000014769 C2H2 ZF 440 463

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANIA_01217 Aspergillus nidulans CADANIAG00001407 D 0.000
PV08_07787 Exophiala spinifera PV08_07787 I 0.000
PV08_07384 Exophiala spinifera PV08_07384 I 0.000
PV07_01540 Cladophialophora immunda PV07_01540 I 0.000
PV06_07565 Exophiala oligosperma PV06_07565 I 0.000
PV05_06344 Exophiala xenobiotica PV05_06344 I 0.000
PV04_02769 Capronia semiimmersa PV04_02769 I 0.000
PMAA_043800 Talaromyces marneffei PMAA_043800 I 0.000
PITC_039850 Penicillium italicum PITC_039850 I 0.000
PEX1_030790 Penicillium expansum PEX1_030790 I 0.000
PDIP_31370 Penicillium digitatum PDIP_31370 I 0.000
PDE_07199 Penicillium oxalicum PDE_07199 I 0.000
PCH_Pc16g04210 Penicillium rubens PCH_Pc16g04210 I 0.000
PMAA_043800 Penicillium marneffei PMAA_043800 I 0.000
PV10_01375 Exophiala mesophila PV10_01375 I 0.000
PV11_05046 Exophiala sideris PV11_05046 I 0.000
Pc16g04210 Penicillium chrysogenum Pc16g04210 I 0.000
fgenesh1_pg.00083_#_673 Aspergillus carbonarius fgenesh1_pg.00083_#_673 I 0.000
Z519_09403 Cladophialophora bantiana Z519_09403 I 0.000
Z517_04522 Fonsecaea pedrosoi Z517_04522 I 0.000
UREG_03403 Uncinocarpus reesii UREG_03403 I 0.000
U727_00434030131 Penicillium solitum U727_00434030131 I 0.000
TSTA_074790 Talaromyces stipitatus TSTA_074790 I 0.000
TRV_02965 Trichophyton verrucosum TRV_02965 I 0.000
TESG_07530 Trichophyton tonsurans TESG_07530 I 0.000
TEQG_04003 Trichophyton equinum TEQG_04003 I 0.000
PVAR5_8900 Byssochlamys spectabilis PVAR5_8900 I 0.000
PABG_03356 Paracoccidioides brasiliensis PABG_03356 I 0.000
PAAG_02895 Paracoccidioides sp lutzii PAAG_02895 I 0.000
MGYG_03394 Microsporum gypseum MGYG_03394 I 0.000
AFUA_1G10580 Aspergillus fumigatus CADAFUAG00007238 I 0.000
CADAFLAG00008334 Aspergillus flavus CADAFLAG00008334 I 0.000
ACLA_024940 Aspergillus clavatus CADACLAG00003063 I 0.000
BDDG_03637 Blastomyces dermatitidis BDDG_03637 I 0.000
ARB_03169 Arthroderma benhamiae ARB_03169 I 0.000
A1O9_06998 Exophiala aquamarina A1O9_06998 I 0.000
A1O7_02602 Cladophialophora yegresii A1O7_02602 I 0.000
A1O5_08179 Cladophialophora psammophila A1O5_08179 I 0.000
A1O3_01186 Capronia epimyces A1O3_01186 I 0.000
A1O1_04236 Capronia coronata A1O1_04236 I 0.000
MCYG_03787 Microsporum canis MCYG_03787 I 0.000
CADANGAG00006576 Aspergillus niger CADANGAG00006576 I 0.000
CADAORAG00009146 Aspergillus oryzae CADAORAG00009146 I 0.000
NFIA_015070 Neosartorya fischeri CADNFIAG00000868 I 0.000
MCYG_03787 Arthroderma otae MCYG_03787 I 0.000
HMPREF1541_00873 Cyphellophora europaea HMPREF1541_00873 I 0.000
HMPREF1120_08383 Exophiala dermatitidis HMPREF1120_08383 I 0.000
HCBG_03212 Histoplasma capsulatum HCBG_03212 I 0.000
H105_03921 Trichophyton soudanense H105_03921 I 0.000
H102_03894 Trichophyton rubrum H102_03894 I 0.000
H101_06311 Trichophyton interdigitale H101_06311 I 0.000
G647_05771 Cladophialophora carrionii G647_05771 I 0.000
EURHEDRAFT_518531 Aspergillus ruber EURHEDRAFT_518531 I 0.000
EPUS_07013 Endocarpon pusillum EPUS_07013 I 0.000
CPC735_014230 Coccidioides posadasii CPC735_014230 I 0.000
CIMG_08965 Coccidioides immitis CIMG_08965 I 0.000