ZNF479 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000010757 T107948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF479
M07673_2.00
Homo sapiens
NNNRBCCYCMRRGTCHTC

GADGACYYKGRGGVYNNN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF479.RCADE.OriginalMapping
0.822 0.984
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000032837 C2H2 ZF 213 235
ENSPTRP00000032837 C2H2 ZF 241 263
ENSPTRP00000032837 C2H2 ZF 269 291
ENSPTRP00000032837 C2H2 ZF 297 319
ENSPTRP00000032837 C2H2 ZF 325 347
ENSPTRP00000032837 C2H2 ZF 353 375
ENSPTRP00000032837 C2H2 ZF 381 403
ENSPTRP00000032837 C2H2 ZF 409 431
ENSPTRP00000032837 C2H2 ZF 437 459
ENSPTRP00000032837 C2H2 ZF 465 487
ENSPTRP00000032837 C2H2 ZF 493 515

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_19464 Aegilops tauschii F775_19464 N 0.000
AMAG_12457 Allomyces macrogynus AMAG_12457 N 0.000
AMAG_12459 Allomyces macrogynus AMAG_12459 N 0.000
CC1G_01834 Coprinopsis cinerea CC1G_01834 N 0.000
EDP44665.1 Malassezia globosa EDP44665.1 N 0.000
EuGene.0000160082 Micromonas pusilla EuGene.0000160082 N 0.000
NAPIS_ORF00600 Nosema apis NAPIS_ORF00600 N 0.000
OSTLU_27999 Ostreococcus lucimarinus OSTLU_27999 N 0.000
gw1.16.233.1 Ostreococcus RCC809 gw1.16.233.1 N 0.000
fgenesh1_pg.C_Chr_17.0001000037 Ostreococcus tauri fgenesh1_pg.C_Chr_17.0001000037 N 0.000
Traes_1DS_91D14CD7B Triticum aestivum Traes_1DS_91D14CD7B N 0.000
Traes_1BS_C5E6FB087 Triticum aestivum Traes_1BS_C5E6FB087 N 0.000
Traes_1AS_306BB8CFE Triticum aestivum Traes_1AS_306BB8CFE N 0.000