CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HKR1
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000010907
T107975_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HKR1
M07662_2.00
Homo sapiens
NYBNBVYCCTCCHYNBYBMVB
VBKVRVNRDGGAGGRBVNVRN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
HKR1.RCADE.ReprocessedData
0.820
0.993
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000046527
C2H2 ZF
281
303
YGCRECGRGFTWKSNLITHQRTH
ENSPTRP00000046527
C2H2 ZF
309
331
YVCKDCGRGFTWKSNLFTHQRTH
ENSPTRP00000046527
C2H2 ZF
337
359
YVCKECGQSFSLKSNLITHQRAH
ENSPTRP00000046527
C2H2 ZF
365
387
YVCRECGRGFRQHSHLVRHKRTH
ENSPTRP00000046527
C2H2 ZF
393
415
YICRECEQGFSQKSHLIRHLRTH
ENSPTRP00000046527
C2H2 ZF
421
443
YVCTECGRHFSWKSNLKTHQRTH
ENSPTRP00000046527
C2H2 ZF
449
471
YVCLECGQCFSLKSNLNKHQRSH
ENSPTRP00000046527
C2H2 ZF
477
499
FVCTECGRGFTRKSTLITHQRTH
ENSPTRP00000046527
C2H2 ZF
505
527
FVCAECGRGFNDKSTLISHQRTH
ENSPTRP00000046527
C2H2 ZF
533
555
FMCRECGRRFRQKPNLFRHKRAH
ENSPTRP00000046527
C2H2 ZF
559
581
FVCRECGQGFCAKLTLIKHQRAH
ENSPTRP00000046527
C2H2 ZF
587
609
HVCRECGQGFSRQSHLIRHQRTH
ENSPTRP00000046527
C2H2 ZF
615
637
YICRKCGRGFSRKSNLIRHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy