CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF460
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000011548
T108035_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF460
M04627_2.00
Homo sapiens
CAACGCCCCCCGN
NCGGGGGGCGTTG
SELEX
Yin et al.(2017)
ZNF460_eDBD_HT-SELEX
0.827
1.000
ZNF460
M07727_2.00
Homo sapiens
SSCCDCCKCCCS
SGGGMGGHGGSS
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF460.RCADE.ReprocessedData
0.827
1.000
ZNF460
M04628_2.00
Homo sapiens
NNMCBCCCCCCVN
NBGGGGGGVGKNN
SELEX
Yin et al.(2017)
ZNF460_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000019873
C2H2 ZF
196
218
YDCPECGKAFGKSKHLLQHHIIH
ENSPTRP00000019873
C2H2 ZF
224
246
YKCLECGKDFNRRSHLTRHQRTH
ENSPTRP00000019873
C2H2 ZF
252
274
FVCSECGRTFNRGSHLTRHQRVH
ENSPTRP00000019873
C2H2 ZF
280
302
FVCNECGKAFTYRSNFVLHNKSH
ENSPTRP00000019873
C2H2 ZF
308
330
FACSECGKGFYESTALIQHFIIH
ENSPTRP00000019873
C2H2 ZF
336
358
FKCLECGKAFNCRSHLKQHERIH
ENSPTRP00000019873
C2H2 ZF
364
386
FVCSQCGKAFTHYSTYVLHERAH
ENSPTRP00000019873
C2H2 ZF
392
414
FECKECGKAFSIRKDLIRHFNIH
ENSPTRP00000019873
C2H2 ZF
420
442
YECLQCGKAFTRMSGLTRHQWIH
ENSPTRP00000019873
C2H2 ZF
448
470
YVCIQCGKAFCRTTNLIRHFSIH
ENSPTRP00000019873
C2H2 ZF
476
498
YECVECGKAFNRRSPLTRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy