ZNF550 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000011560 T108043_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF550
M07772_2.00
Homo sapiens
TGCCYTAGCMBWSRYTYY

RRARYSWVKGCTARGGCA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000009623 C2H2 ZF 203 225
ENSPTRP00000009623 C2H2 ZF 231 253
ENSPTRP00000009623 C2H2 ZF 259 281
ENSPTRP00000009623 C2H2 ZF 287 309
ENSPTRP00000009623 C2H2 ZF 315 337
ENSPTRP00000009623 C2H2 ZF 343 365
ENSPTRP00000009623 C2H2 ZF 371 393
ENSPTRP00000009623 C2H2 ZF 399 421

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

Invalid Input OrderBy

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action