CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF343
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000013177
T108083_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF343
M04404_2.00
Homo sapiens
VCGCTTCMCCDCGGYMN
NKRCCGHGGKGAAGCGB
SELEX
Yin et al.(2017)
ZNF343_eDBD_HT-SELEX
0.824
0.996
ZNF343
M07569_2.00
Homo sapiens
VGCTTCMCB
VGKGAAGCB
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF343.RCADE.ReprocessedData
0.824
0.996
ZNF343
M04405_2.00
Homo sapiens
VYGCTTCACBRYGGYMN
NKRCCRYVGTGAAGCRB
SELEX
Yin et al.(2017)
ZNF343_eDBD_Methyl-HT-SELEX
0.824
0.996
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000052455
C2H2 ZF
269
291
YICSDCGRSFKDRSTLIRHHRIH
ENSPTRP00000052455
C2H2 ZF
297
319
YVCSECGRGFSQKSNLSRHQRTH
ENSPTRP00000052455
C2H2 ZF
325
347
YLCRECGQSFRSKSILSRHQWTH
ENSPTRP00000052455
C2H2 ZF
353
375
YVCSECGRGFSEKSSFIRHQRTH
ENSPTRP00000052455
C2H2 ZF
381
403
YVCLECGRSFCDKSTLRKHQRIH
ENSPTRP00000052455
C2H2 ZF
409
431
YVCRECGRGFSQNSDLIKHQRTH
ENSPTRP00000052455
C2H2 ZF
437
459
YVCRECGRGFCDKSTLIIHERTH
ENSPTRP00000052455
C2H2 ZF
465
487
YVCGECGRGFSRKSLLLVHQRTH
ENSPTRP00000052455
C2H2 ZF
493
515
YVCRECRRGFSQKSNLIRHQRTH
ENSPTRP00000052455
C2H2 ZF
521
543
YICRECGRGFCDKSTLIVHERTH
ENSPTRP00000052455
C2H2 ZF
549
571
YVCSECGRGFSRKSLLLVHQRTH
ENSPTRP00000052455
C2H2 ZF
577
599
YVCRECGRGFSHKSNLIRHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy