ZSCAN23 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000017876 T108153_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN23
M04613_2.00
Homo sapiens
NYCATGTGCTAATTACAVN

NBTGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX
0.827 1.000
ZSCAN23
M04614_2.00
Homo sapiens
NYCATGTGCTAATTACRHN

NDYGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000030484 C2H2 ZF 249 271
ENSPTRP00000030484 C2H2 ZF 277 299
ENSPTRP00000030484 C2H2 ZF 305 327
ENSPTRP00000030484 C2H2 ZF 333 355
ENSPTRP00000030484 C2H2 ZF 361 383

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MhA1_Contig637.frz3.gene2 Meloidogyne hapla MhA1_Contig637.frz3.gene2 N 0.000
Minc06391 Meloidogyne incognita Minc06391 N 0.000
Minc14105 Meloidogyne incognita Minc14105 N 0.000