ZNF250 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000023097 T108271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.826 0.997
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.826 0.997
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.826 0.997
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.826 0.997
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.826 0.997
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000035436 C2H2 ZF 199 221
ENSPTRP00000035436 C2H2 ZF 227 249
ENSPTRP00000035436 C2H2 ZF 255 277
ENSPTRP00000035436 C2H2 ZF 283 305
ENSPTRP00000035436 C2H2 ZF 311 333
ENSPTRP00000035436 C2H2 ZF 339 361
ENSPTRP00000035436 C2H2 ZF 367 389
ENSPTRP00000035436 C2H2 ZF 395 417
ENSPTRP00000035436 C2H2 ZF 423 445
ENSPTRP00000035436 C2H2 ZF 451 473
ENSPTRP00000035436 C2H2 ZF 479 501
ENSPTRP00000035436 C2H2 ZF 507 529
ENSPTRP00000035436 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.794
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.826
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.794
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.816
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.826
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.766
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.816
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.800
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.799
ZNF250 Felis catus ENSFCAG00000013730 I 0.795
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.826
ZNF250 Homo sapiens ENSG00000196150 D 0.826
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.806
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.826
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.826
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.793
Zfp647 Mus musculus ENSMUSG00000054967 I 0.817
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.794
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.826
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.816
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.801
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.826
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.826
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.801
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.781
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.817
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.817
ZNF250 Sorex araneus ENSSARG00000004999 I 0.804
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.793
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.819
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.774