ZNF548 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000024292 T108318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF548
M07691_2.00 		Homo sapiens
CCTGCHGVCVCCBBSVYYBBG
CVVRRBSVVGGBGBCDGCAGG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF548.RCADE.OriginalMapping 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000040298 C2H2 ZF 209 231
ENSPTRP00000040298 C2H2 ZF 237 259
ENSPTRP00000040298 C2H2 ZF 265 287
ENSPTRP00000040298 C2H2 ZF 293 315
ENSPTRP00000040298 C2H2 ZF 321 343
ENSPTRP00000040298 C2H2 ZF 349 371
ENSPTRP00000040298 C2H2 ZF 377 399
ENSPTRP00000040298 C2H2 ZF 405 427
ENSPTRP00000040298 C2H2 ZF 433 455
ENSPTRP00000040298 C2H2 ZF 461 483
ENSPTRP00000040298 C2H2 ZF 489 511

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF548 Homo sapiens ENSG00000188785 D 0.827
ENSPPYG00000010464 Pongo abelii ENSPPYG00000010464 I 0.827
ENSGGOG00000014653 Gorilla gorilla ENSGGOG00000014653 I 0.827
ENSNLEG00000010956 Nomascus leucogenys ENSNLEG00000010956 I 0.826
ENSP00000337555 Macaca fascicularis ENSP00000337555 I 0.824
ENSMMUG00000014281 Macaca mulatta ENSMMUG00000014281 I 0.824
ENSCSAG00000001640 Chlorocebus sabaeus ENSCSAG00000001640 I 0.824
ENSPANG00000020840 Papio anubis ENSPANG00000020840 I 0.824
ENSCJAG00000000033 Callithrix jacchus ENSCJAG00000000033 I 0.817
ENSTSYG00000000332 Tarsius syrichta ENSTSYG00000000332 I 0.811
ENSTSYG00000010306 Tarsius syrichta ENSTSYG00000010306 I 0.811