CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ZFP42 *(Pan troglodytes)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSPTRG00000031054	T108361_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZFP42 M04581_2.00	Homo sapiens	NGDCVGCCATMTTGN	NCAAKATGGCBGHCN	SELEX Yin et al.(2017) ZFP42_eDBD_HT-SELEX	0.815	0.989
ZFP42 M08348_2.00	Homo sapiens	GSMGCCATYTTN	NAARATGGCKSC	ChIP-seq Schmitges et al.(2016) Q96MM3_1-4.RCADE	0.815	0.989
ZFP42 M08927_2.00	Homo sapiens	VGSMGCCATYTT	AARATGGCKSCB	Misc Kulakovskiy et al.(2013) ZFP42_HUMAN.H11MO.0.A	0.815	0.989
ZFP42 M10278_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$REX1_03	0.815	0.989
ZFP42 M04582_2.00	Homo sapiens	NGGCRGCCATMTTGN	NCAAKATGGCYGCCN	SELEX Yin et al.(2017) ZFP42_eDBD_Methyl-HT-SELEX	0.815	0.989
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSPTRP00000053256	C2H2 ZF	188	212	IACPQSGCTRKLRNRAALRKHLLIH
ENSPTRP00000053256	C2H2 ZF	217	239	HVCAECGKAFVESSKLKRHFLVH
ENSPTRP00000053256	C2H2 ZF	245	269	FQCTFEGCGKRFSLDFNLRTHVRIH
ENSPTRP00000053256	C2H2 ZF	275	299	FVCPFQGCNRRFIQSNNLKAHILTH

Links
Other C2H2 ZF family TFs
Other *Pan troglodytes* TFs