ZNF18 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000014085 T108745_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF18
M08316_2.00 		Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN		 ChIP-seq
Schmitges et al.(2016)
P17022.MEME 		0.809 0.956
ZNF18
M07602_2.00 		Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData 		0.809 0.956
ZNF18
M08901_2.00 		Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN		 Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C 		0.809 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000013282 C2H2 ZF 399 420
ENSPVAP00000013282 C2H2 ZF 426 448
ENSPVAP00000013282 C2H2 ZF 454 476
ENSPVAP00000013282 C2H2 ZF 482 504
ENSPVAP00000013282 C2H2 ZF 510 532

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

Invalid Input OrderBy

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action