CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000016750
T108812_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.819
0.980
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.819
0.980
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.819
0.980
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.772
0.916
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000015803
C2H2 ZF
215
237
YKCSMCEKTFINTSSLRKHEKNH
ENSPVAP00000015803
C2H2 ZF
243
265
FKCKECSKAFNQSSALIQHQITH
ENSPVAP00000015803
C2H2 ZF
271
293
YVCKECGKAFTLSTSLYKHLRTH
ENSPVAP00000015803
C2H2 ZF
299
321
YRCKECGKSFSRRSGLFIHQKIH
ENSPVAP00000015803
C2H2 ZF
355
377
YLCNECGNTFKSSSSLRYHQRIH
ENSPVAP00000015803
C2H2 ZF
383
405
FKCGECGRAFSQSASLIQHERIH
ENSPVAP00000015803
C2H2 ZF
411
433
YRCNECGKGFTSISRLNRHRIIH
ENSPVAP00000015803
C2H2 ZF
439
461
YNCNECGKALSSHSTLIIHERIH
ENSPVAP00000015803
C2H2 ZF
467
489
CKCKVCGKAFRQSSALIQHQRMH
ENSPVAP00000015803
C2H2 ZF
495
517
YKCSECGKTFRCNSSLSNHQRIH
ENSPVAP00000015803
C2H2 ZF
523
545
YRCEECGISFGQSSALIQHRRIH
ENSPVAP00000015803
C2H2 ZF
551
573
FKCNTCGKTFRQSSSRIAHQRIH
ENSPVAP00000015803
C2H2 ZF
579
601
YECNTCGKLFNHRSSLTNHYKVH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy