Glis1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000000138 T108848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN

NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.827 1.000
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH

DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.827 1.000
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV

BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.827 1.000
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV

BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000036043 C2H2 ZF 319 346
ENSRNOP00000036043 C2H2 ZF 353 376
ENSRNOP00000036043 C2H2 ZF 382 406
ENSRNOP00000036043 C2H2 ZF 412 436
ENSRNOP00000064202 C2H2 ZF 319 346
ENSRNOP00000064202 C2H2 ZF 353 376
ENSRNOP00000064202 C2H2 ZF 382 406
ENSRNOP00000064202 C2H2 ZF 412 436

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action