Rbak (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000001099 T108861_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBAK
M07595_2.00
Homo sapiens
BSYYBYTYSTYHCBN

NVGDRASRARVRRSV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData
0.768 0.932
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000001455 C2H2 ZF 258 280
ENSRNOP00000001455 C2H2 ZF 286 308
ENSRNOP00000001455 C2H2 ZF 314 336
ENSRNOP00000001455 C2H2 ZF 342 364
ENSRNOP00000001455 C2H2 ZF 370 392
ENSRNOP00000001455 C2H2 ZF 398 420
ENSRNOP00000001455 C2H2 ZF 426 448
ENSRNOP00000001455 C2H2 ZF 454 476
ENSRNOP00000001455 C2H2 ZF 510 527
ENSRNOP00000001455 C2H2 ZF 536 558
ENSRNOP00000001455 C2H2 ZF 564 586
ENSRNOP00000001455 C2H2 ZF 592 614
ENSRNOP00000001455 C2H2 ZF 620 642
ENSRNOP00000001455 C2H2 ZF 648 670
ENSRNOP00000001455 C2H2 ZF 676 698
ENSRNOP00000072704 C2H2 ZF 235 257
ENSRNOP00000072704 C2H2 ZF 263 285
ENSRNOP00000072704 C2H2 ZF 291 313
ENSRNOP00000072704 C2H2 ZF 319 341
ENSRNOP00000072704 C2H2 ZF 347 369
ENSRNOP00000072704 C2H2 ZF 375 397
ENSRNOP00000072704 C2H2 ZF 403 425
ENSRNOP00000072704 C2H2 ZF 431 453
ENSRNOP00000072704 C2H2 ZF 487 504
ENSRNOP00000072704 C2H2 ZF 513 535
ENSRNOP00000072704 C2H2 ZF 541 563
ENSRNOP00000072704 C2H2 ZF 569 591
ENSRNOP00000072704 C2H2 ZF 597 619
ENSRNOP00000072704 C2H2 ZF 625 647
ENSRNOP00000072704 C2H2 ZF 653 675

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Rbak Mus musculus ENSMUSG00000061898 I 0.801
RBAK Myotis lucifugus ENSMLUG00000004409 I 0.779
ENSOARG00000002641 Ovis aries ENSOARG00000002641 I 0.771
RBAK Bos taurus ENSBTAG00000010291 I 0.771
RBAK Callithrix jacchus ENSCJAG00000021500 I 0.769
ENSPANG00000015671 Papio anubis ENSPANG00000015671 I 0.768
ENSPPYG00000017329 Pongo abelii ENSPPYG00000017329 I 0.768
RBAK Pan troglodytes ENSPTRG00000018880 I 0.768
ENSCSAG00000017653 Chlorocebus sabaeus ENSCSAG00000017653 I 0.768
ENSNLEG00000015490 Nomascus leucogenys ENSNLEG00000015490 I 0.768
ENSMMUG00000006521 Macaca mulatta ENSMMUG00000006521 I 0.768
ENSP00000275423 Macaca fascicularis ENSP00000275423 I 0.768
RBAK Homo sapiens ENSG00000146587 D 0.768
RBAK Gorilla gorilla ENSGGOG00000008465 I 0.768
ENSMPUG00000016607 Mustela putorius furo ENSMPUG00000016607 I 0.764