Zkscan1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000001335 T108864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN

NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.827 1.000
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.827 1.000
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH

DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.825 0.993
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000051042 C2H2 ZF 376 398
ENSRNOP00000051042 C2H2 ZF 404 426
ENSRNOP00000051042 C2H2 ZF 432 454
ENSRNOP00000051042 C2H2 ZF 460 482
ENSRNOP00000051042 C2H2 ZF 488 510
ENSRNOP00000051042 C2H2 ZF 516 538

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011684 Calypte anna Aan_R011684 I 0.000
Aan_R011791 Calypte anna Aan_R011791 I 0.000
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.000
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.000
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.000
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.000
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.000
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.000
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.000
CapteG155070 Capitella teleta CapteG155070 I 0.000
CapteG191691 Capitella teleta CapteG191691 I 0.000
CGI_10028818 Crassostrea gigas CGI_10028818 I 0.000
CLEC002862 Cimex lectularius CLEC002862 I 0.000
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.000
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.000
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.000
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.000
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.000
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.000
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.000
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.000
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.000
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.000
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.000
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.000
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.000
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.000
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.000
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.000
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.000
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.000
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.000
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.000
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.000
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.000
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.000
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.000
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.000
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.000
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.000
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.000
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.000
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I 0.000
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.000
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.000
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.000
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.000
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.000
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.000
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.000
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.000
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.000
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.000
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.000
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.000
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.000
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.000
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.000
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.000
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.000
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.000
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.000
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.000
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.000
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.000
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.000
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.000
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.000
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.000
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.000
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.000
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.000
GB41600 Apis mellifera GB41600 I 0.000
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.000
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.000
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.000
HMEL017569 Heliconius melpomene HMEL017569 I 0.000
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.000
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.000
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.000
HMG20A Sorex araneus ENSSARG00000012609 I 0.000
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.000
HMG20A Sus scrofa ENSSSCG00000001871 I 0.000
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.000
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.000
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.000
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.000
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.000
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.000
HMG20A Homo sapiens ENSG00000140382 I 0.000
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.000
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.000
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.000
HMG20A Microcebus murinus ENSMICG00000011025 I 0.000
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.000
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.000
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.000
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.000
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.000
HMG20A Felis catus ENSFCAG00000022539 I 0.000
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.000
HMG20A Canis familiaris ENSCAFG00000018061 I 0.000
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.000
HMG20A Bos taurus ENSBTAG00000020441 I 0.000
HMG20A Procavia capensis ENSPCAG00000013879 I 0.000
hmg20a Danio rerio ENSDARG00000031198 I 0.000
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.000
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.000
hmg20a Oryzias latipes ENSORLG00000001794 I 0.000
Hmg20a Mus musculus ENSMUSG00000032329 I 0.000
HMG20A Ochotona princeps ENSOPRG00000011000 I 0.000
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.000
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.000
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.000
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.000
HMG20A Echinops telfairi ENSETEG00000015812 I 0.000
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.000
HMG20B Homo sapiens ENSG00000064961 I 0.000
HMG20B Canis familiaris ENSCAFG00000019215 I 0.000
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.000
hmg20b Danio rerio ENSDARG00000042045 I 0.000
HMG20B Gallus gallus ENSGALG00000027838 I 0.000
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.000
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.000
HMG20B Felis catus ENSFCAG00000026167 I 0.000
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.000
HMG20B Pteropus vampyrus ENSPVAG00000004300 I 0.000
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.000
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.000
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.000
Hmg20b Mus musculus ENSMUSG00000020232 D 0.000
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.000
hmg20b Oryzias latipes ENSORLG00000004640 I 0.000
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.000
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.000
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.000
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.000
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.000
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.000
HMG20B Procavia capensis ENSPCAG00000010772 I 0.000
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.000
HMG20B Pan troglodytes ENSPTRG00000010268 I 0.000
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.000
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.000
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.000
L798_15457 Zootermopsis nevadensis L798_15457 I 0.000
LDEC010438 Leptinotarsa decemlineata LDEC010438 I 0.000
LotgiG196090 Lottia gigantea LotgiG196090 I 0.000
LotgiG231408 Lottia gigantea LotgiG231408 I 0.000
MCINX003064 Melitaea cinxia MCINX003064 I 0.000
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.000
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.000
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.000
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.000
NV11068 Nasonia vitripennis NV11068 I 0.000
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.000
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.000
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.000
RPRC008043 Rhodnius prolixus RPRC008043 I 0.000
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I 0.000
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.000
SMAR000790 Strigamia maritima SMAR000790 I 0.000
SMAR002604 Strigamia maritima SMAR002604 I 0.000
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.000
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.000
Tal_R006697 Tyto alba Tal_R006697 I 0.000
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.000
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.000
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.000
YQE_10385 Dendroctonus ponderosae YQE_10385 I 0.000