Zkscan1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000001335 T108864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zkscan1
M00771_2.00
Mus musculus
NNNHDHDNNN

NNNHDHDNNN
PBM
Weirauch et al.(2013)
pTH2280
0.827 1.000
Zkscan1
M08985_2.00
Mus musculus
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A
0.827 1.000
ZKSCAN1
M05847_2.00
Homo sapiens
NNNCCTACTAHGH

DCDTAGTAGGNNN
SMiLE-seq
Isakova et al.(2017)
ZKSCAN1
0.825 0.993
ZKSCAN1
M08874_2.00
Homo sapiens
DVHDBNCCTACTRTGTGCH

DGCACAYAGTAGGNVHDBH
Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B
0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000051042 C2H2 ZF 376 398
ENSRNOP00000051042 C2H2 ZF 404 426
ENSRNOP00000051042 C2H2 ZF 432 454
ENSRNOP00000051042 C2H2 ZF 460 482
ENSRNOP00000051042 C2H2 ZF 488 510
ENSRNOP00000051042 C2H2 ZF 516 538

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SALL1 Canis familiaris ENSCAFG00000009755 I 0.000
SALL1 Cavia porcellus ENSCPOG00000006564 N 0.000
SALL1 Gorilla gorilla ENSGGOG00000000663 I 0.000
SALL1 Loxodonta africana ENSLAFG00000015251 I 0.000
ENSNLEG00000001008 Nomascus leucogenys ENSNLEG00000001008 N 0.000
ENSPANG00000024176 Papio anubis ENSPANG00000024176 N 0.000
ENSSHAG00000009477 Sarcophilus harrisii ENSSHAG00000009477 I 0.000