CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Prdm15
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000001620
T108867_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM15
M10222_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM15_04
0.822
0.970
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000041592
C2H2 ZF
376
398
HQCGTCSKVFQNSSNLSRHVRSH
ENSRNOP00000041592
C2H2 ZF
408
431
FKCEECSKLFSRKESLKQHVSYKH
ENSRNOP00000041592
C2H2 ZF
442
462
YRCGSCGKTFRMESALEFHNC
ENSRNOP00000041592
C2H2 ZF
469
491
FQCEMCFRFFSTNSNLSKHKKKH
ENSRNOP00000041592
C2H2 ZF
496
518
FACEVCSKMFYRKDVMLDHQRRH
ENSRNOP00000041592
C2H2 ZF
547
567
CPVCGKVFSCRSNMNKHLLTH
ENSRNOP00000041592
C2H2 ZF
572
594
YTCEICGRKFFRVDVLRDHIHVH
ENSRNOP00000041592
C2H2 ZF
635
658
YSCKRCQLTFGRGKEYLKHIMEVH
ENSRNOP00000041592
C2H2 ZF
665
685
CSICHRRFALKATYHAHMVIH
ENSRNOP00000041592
C2H2 ZF
699
721
HPCEICGRIFNSIGNLERHKLIH
ENSRNOP00000041592
C2H2 ZF
727
749
HACEQCGKSFARKDMLKEHMRVH
ENSRNOP00000041592
C2H2 ZF
755
777
YLCAECGKGMKTKHALRHHMKLH
ENSRNOP00000041592
C2H2 ZF
783
805
YECKECHRKFAQKVNMLKHYKRH
ENSRNOP00000041592
C2H2 ZF
811
833
FMCELCGKTFSERNTMETHKLIH
ENSRNOP00000041592
C2H2 ZF
839
862
WTCSVCDKKYVTEYMLQKHVQLTH
ENSRNOP00000041592
C2H2 ZF
868
891
QSCQLCGTKVSTRASMSRHMRRKH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy