CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp13
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000003455
T108882_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF205
M07578_2.00
Homo sapiens
CAACTCTCC
GGAGAGTTG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF205.MEME.OriginalMapping
0.808
0.967
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000004589
C2H2 ZF
153
175
YKCEQCGKGFSWHSHLVTHRRTH
ENSRNOP00000004589
C2H2 ZF
181
203
YTCTDCGKRFGRSSHLIQHQIIH
ENSRNOP00000004589
C2H2 ZF
209
231
YTCPSCWKSFSHHSTLIQHQRIH
ENSRNOP00000004589
C2H2 ZF
237
259
YVCDRCAKRFTRRSDLVTHQGTH
ENSRNOP00000004589
C2H2 ZF
265
287
HKCPICGKCFTQSSALVTHQRTH
ENSRNOP00000004589
C2H2 ZF
293
315
YPCPECGKCFSQRSNLIAHNRTH
ENSRNOP00000004589
C2H2 ZF
321
343
YHCLDCGKSFSHSSHLTAHQRTH
ENSRNOP00000004589
C2H2 ZF
349
371
YSCPLCGKSFSRRSNLHRHEKIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy