Zfp354a (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000003634 T108883_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF354A
M08331_2.00 		Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY		 ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE 		0.813 0.967
ZNF354A
M07622_2.00 		Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping 		0.813 0.967
ZNF354A
M08914_2.00 		Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH		 Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C 		0.813 0.967
ZNF354B
M07653_2.00 		Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData 		0.767 0.916
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000049437 C2H2 ZF 188 210
ENSRNOP00000049437 C2H2 ZF 216 238
ENSRNOP00000049437 C2H2 ZF 244 266
ENSRNOP00000049437 C2H2 ZF 272 294
ENSRNOP00000049437 C2H2 ZF 325 347
ENSRNOP00000049437 C2H2 ZF 353 375
ENSRNOP00000049437 C2H2 ZF 381 403
ENSRNOP00000049437 C2H2 ZF 409 431
ENSRNOP00000049437 C2H2 ZF 437 459
ENSRNOP00000049437 C2H2 ZF 465 487
ENSRNOP00000049437 C2H2 ZF 493 515
ENSRNOP00000049437 C2H2 ZF 521 543
ENSRNOP00000049437 C2H2 ZF 549 571
ENSRNOP00000070798 C2H2 ZF 142 164
ENSRNOP00000070798 C2H2 ZF 170 192
ENSRNOP00000070798 C2H2 ZF 198 220
ENSRNOP00000070798 C2H2 ZF 226 248
ENSRNOP00000070798 C2H2 ZF 279 301
ENSRNOP00000070798 C2H2 ZF 307 329
ENSRNOP00000070798 C2H2 ZF 335 357
ENSRNOP00000070798 C2H2 ZF 363 385
ENSRNOP00000070798 C2H2 ZF 391 413
ENSRNOP00000070798 C2H2 ZF 419 441
ENSRNOP00000070798 C2H2 ZF 447 469
ENSRNOP00000070798 C2H2 ZF 475 497
ENSRNOP00000070798 C2H2 ZF 503 525

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action