Zfp18 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000003981 T108884_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF18
M08316_2.00 		Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN		 ChIP-seq
Schmitges et al.(2016)
P17022.MEME 		0.806 0.956
ZNF18
M07602_2.00 		Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData 		0.806 0.956
ZNF18
M08901_2.00 		Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN		 Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C 		0.806 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000005518 C2H2 ZF 416 437
ENSRNOP00000005518 C2H2 ZF 443 465
ENSRNOP00000005518 C2H2 ZF 471 493
ENSRNOP00000005518 C2H2 ZF 499 521
ENSRNOP00000005518 C2H2 ZF 527 549

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zkscan6 Mus musculus ENSMUSG00000018347 I 0.823
ENSTSYG00000006855 Tarsius syrichta ENSTSYG00000006855 I 0.814
ZNF18 Pan troglodytes ENSPTRG00000008782 I 0.814
ENSPPYG00000007992 Pongo abelii ENSPPYG00000007992 I 0.814
ZNF18 Oryctolagus cuniculus ENSOCUG00000010095 I 0.814
ENSNLEG00000014526 Nomascus leucogenys ENSNLEG00000014526 I 0.814
ENSSTOG00000012652 Ictidomys tridecemlineatus ENSSTOG00000012652 I 0.814
ZNF18 Callithrix jacchus ENSCJAG00000004790 I 0.814
ZNF18 Otolemur garnettii ENSOGAG00000027830 I 0.810
ZNF18 Microcebus murinus ENSMICG00000016196 I 0.807
ZNF18 Tupaia belangeri ENSTBEG00000007103 I 0.806
ZNF18 Homo sapiens ENSG00000154957 D 0.806
ZNF18 Pteropus vampyrus ENSPVAG00000014085 I 0.805
ZNF18 Sorex araneus ENSSARG00000003073 I 0.805
ENSMPUG00000003670 Mustela putorius furo ENSMPUG00000003670 I 0.805
ZNF18 Dasypus novemcinctus ENSDNOG00000036895 I 0.805
ZNF18 Choloepus hoffmanni ENSCHOG00000001767 I 0.805
ZNF18 Canis familiaris ENSCAFG00000017843 I 0.805
ENSAMEG00000013156 Ailuropoda melanoleuca ENSAMEG00000013156 I 0.805
ZNF18 Equus caballus ENSECAG00000025164 I 0.805
ZNF18 Erinaceus europaeus ENSEEUG00000011943 I 0.805
ZNF18 Echinops telfairi ENSETEG00000000611 I 0.804
ENSP00000391376 Macaca fascicularis ENSP00000391376 I 0.802
ENSCSAG00000009126 Chlorocebus sabaeus ENSCSAG00000009126 I 0.802
ENSPANG00000023768 Papio anubis ENSPANG00000023768 I 0.802
ZNF18 Felis catus ENSFCAG00000027934 I 0.788