CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gzf1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000004735
T108894_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000006287
C2H2 ZF
316
339
FQCTVCDKAFLYEKSFLKHIKYHH
ENSRNOP00000006287
C2H2 ZF
347
370
YRCDTCGQTFANRCNLKSHQRHVH
ENSRNOP00000006287
C2H2 ZF
376
399
FPCEMCAKKFKRKKDVKRHVLQVH
ENSRNOP00000006287
C2H2 ZF
406
428
HRCGQCGKGLSSKTALRLHERTH
ENSRNOP00000006287
C2H2 ZF
434
456
YGCTKCDAKFSQPSALKTHLRVH
ENSRNOP00000006287
C2H2 ZF
462
484
FVCDECGARFTQNHMLIYHKRCH
ENSRNOP00000006287
C2H2 ZF
490
512
FMCETCGKSFASKEYLKHHNRIH
ENSRNOP00000006287
C2H2 ZF
518
540
FKCEVCLRTFAQRNSLYQHIKVH
ENSRNOP00000006287
C2H2 ZF
546
568
YCCDQCGKQFTQVNALQRHHRIH
ENSRNOP00000006287
C2H2 ZF
574
596
YMCNACGRTFTDKSTLRRHTSIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gzf1
Mus musculus
ENSMUSG00000027439
N
0.827
ENSSTOG00000009820
Ictidomys tridecemlineatus
ENSSTOG00000009820
N
0.803
GZF1
Oryctolagus cuniculus
ENSOCUG00000025214
N
0.801
GZF1
Loxodonta africana
ENSLAFG00000002458
N
0.801
GZF1
Ochotona princeps
ENSOPRG00000004697
N
0.800
GZF1
Pteropus vampyrus
ENSPVAG00000014056
N
0.799
ENSMPUG00000001160
Mustela putorius furo
ENSMPUG00000001160
N
0.799
GZF1
Canis familiaris
ENSCAFG00000005142
N
0.799
ENSLACG00000017381
Latimeria chalumnae
ENSLACG00000017381
N
0.799
GZF1
Equus caballus
ENSECAG00000011343
N
0.798
Myotis_brandtii_GZF1_10004482
Myotis brandtii
Myotis_brandtii_GZF1_10004482
N
0.797
GZF1
Dasypus novemcinctus
ENSDNOG00000014290
N
0.792
GZF1
Bos taurus
ENSBTAG00000008908
N
0.789
GZF1
Sus scrofa
ENSSSCG00000007117
N
0.780