CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp3
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000005009
T108898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP3
M08355_2.00
Homo sapiens
VHRARCTCCTAYNCANCC
GGNTGNRTAGGAGYTYDB
ChIP-seq
Schmitges et al.(2016)
Q96NJ6_1-6.RCADE
0.819
0.970
ZFP3
M08258_2.00
Homo sapiens
AACTCCTAYDCATCC
GGATGHRTAGGAGTT
ChIP-seq
Najafabadi et al.(2015b)
ZFP3
0.819
0.970
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000006641
C2H2 ZF
142
164
HTCKECGKTFNQNSHLIQHMRVH
ENSRNOP00000006641
C2H2 ZF
170
192
FECKECGKTFGTNSSLRRHQRIH
ENSRNOP00000006641
C2H2 ZF
198
220
FACTECGKAFIQSSHLIHHHRIH
ENSRNOP00000006641
C2H2 ZF
226
248
YKCEECGKAFSQNSALILHQRIH
ENSRNOP00000006641
C2H2 ZF
254
276
YECNECRKTFRVSSQLIQHQRIH
ENSRNOP00000006641
C2H2 ZF
282
304
HECSECGKAFKHSSGLIRHQKIH
ENSRNOP00000006641
C2H2 ZF
310
332
YLCNECGKGFGQSSELIRHQRIH
ENSRNOP00000006641
C2H2 ZF
338
360
YECSECGKTFGQNSEIIRHIRIH
ENSRNOP00000006641
C2H2 ZF
366
388
YVCKECGKAFRGNSELLRHERIH
ENSRNOP00000006641
C2H2 ZF
394
416
YECFECGKAFRRTSHLIVHQRIH
ENSRNOP00000006641
C2H2 ZF
422
444
HQCNACARTFWDNSELLLHQKIH
ENSRNOP00000006641
C2H2 ZF
450
472
YECSECEKTFSQHSQLTIHQRTH
ENSRNOP00000006641
C2H2 ZF
478
500
YECQECQKTFSRSSHLLRHQSVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy