Zfp513 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000005298 T108900_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable transcription cis-regulatory region binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II and retina development in camera-type eye. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in retinitis pigmentosa 58. Orthologous to human ZNF513 (zinc finger protein 513). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF513
M08322_2.00 		Homo sapiens
AYCATCATCAYCATC
GATGRTGATGATGRT		 ChIP-seq
Schmitges et al.(2016)
Q8N8E2_4-8.RCADE 		0.827 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000040002 C2H2 ZF 150 172
ENSRNOP00000040002 C2H2 ZF 178 200
ENSRNOP00000040002 C2H2 ZF 206 228
ENSRNOP00000040002 C2H2 ZF 360 382
ENSRNOP00000040002 C2H2 ZF 388 410
ENSRNOP00000040002 C2H2 ZF 416 438
ENSRNOP00000040002 C2H2 ZF 444 466
ENSRNOP00000040002 C2H2 ZF 472 494

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action