CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfx
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000005624
T108904_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfx
M08100_2.00
Mus musculus
BBVRSCBVGGCCTV
BAGGCCBVGSYBVV
ChIP-seq
Mathelier et al.(2014)
MA0146.2
0.826
0.997
Zfx
M09017_2.00
Mus musculus
VVSVSBNBBAGGCCBVGSH
DSCBVGGCCTVVNVSBSBB
Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B
0.826
0.997
Zfx
M09517_2.00
Mus musculus
BNAGGCCT
AGGCCTNV
Misc
Heinz et al.(2010)
mES-Zfx_GSE11431
0.826
0.997
Zfx
M00788_2.00
Mus musculus
NRGGCCNNN
NNNGGCCYN
PBM
Weirauch et al.(2013)
pTH2933
0.825
0.993
ZFX
M08850_2.00
Homo sapiens
YBVGGCCTVS
SBAGGCCBVR
Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A
0.823
0.997
ZFX
M10098_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFX_01
0.823
0.997
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000068137
C2H2 ZF
369
391
YPCMICGKKFKSRGFLKRHMKNH
ENSRNOP00000068137
C2H2 ZF
400
422
YRCTDCDYTTNKKISLHNHLESH
ENSRNOP00000068137
C2H2 ZF
432
454
IECDECGKHFSHAGALFTHKMVH
ENSRNOP00000068137
C2H2 ZF
463
486
HKCKFCEYETAEQGLLNRHLLAVH
ENSRNOP00000068137
C2H2 ZF
492
514
HICVECGKGFRHPSELKKHMRIH
ENSRNOP00000068137
C2H2 ZF
520
543
YECQYCEYRSADSSNLKTHVKTKH
ENSRNOP00000068137
C2H2 ZF
549
571
FKCDICLLTFSDTKEVQQHALIH
ENSRNOP00000068137
C2H2 ZF
577
600
HQCLHCDHKSSNSSDLKRHIISVH
ENSRNOP00000068137
C2H2 ZF
606
628
HKCDMCDKGFHRPSELKKHVAAH
ENSRNOP00000068137
C2H2 ZF
634
657
HQCRHCDFKIADPFVLSRHILSVH
ENSRNOP00000068137
C2H2 ZF
663
685
FRCKRCRKGFRQQSELKKHMKTH
ENSRNOP00000068137
C2H2 ZF
691
714
YQCEYCEYSTTDASGFKRHVISIH
ENSRNOP00000068137
C2H2 ZF
720
743
HRCEYCKKGFRRPSEKNQHIMRHH
ENSRNOP00000068277
C2H2 ZF
419
441
YPCMICGKKFKSRGFLKRHMKNH
ENSRNOP00000068277
C2H2 ZF
450
472
YRCTDCDYTTNKKISLHNHLESH
ENSRNOP00000068277
C2H2 ZF
482
504
IECDECGKHFSHAGALFTHKMVH
ENSRNOP00000068277
C2H2 ZF
513
536
HKCKFCEYETAEQGLLNRHLLAVH
ENSRNOP00000068277
C2H2 ZF
542
564
HICVECGKGFRHPSELKKHMRIH
ENSRNOP00000068277
C2H2 ZF
570
593
YECQYCEYRSADSSNLKTHVKTKH
ENSRNOP00000068277
C2H2 ZF
599
621
FKCDICLLTFSDTKEVQQHALIH
ENSRNOP00000068277
C2H2 ZF
627
650
HQCLHCDHKSSNSSDLKRHIISVH
ENSRNOP00000068277
C2H2 ZF
656
678
HKCDMCDKGFHRPSELKKHVAAH
ENSRNOP00000068277
C2H2 ZF
684
707
HQCRHCDFKIADPFVLSRHILSVH
ENSRNOP00000068277
C2H2 ZF
713
735
FRCKRCRKGFRQQSELKKHMKTH
ENSRNOP00000068277
C2H2 ZF
741
764
YQCEYCEYSTTDASGFKRHVISIH
ENSRNOP00000068277
C2H2 ZF
770
793
HRCEYCKKGFRRPSEKNQHIMRHH
ENSRNOP00000068521
C2H2 ZF
111
133
YPCMICGKKFKSRGFLKRHMKNH
ENSRNOP00000068521
C2H2 ZF
142
164
YRCTDCDYTTNKKISLHNHLESH
ENSRNOP00000068521
C2H2 ZF
174
196
IECDECGKHFSHAGALFTHKMVH
ENSRNOP00000068521
C2H2 ZF
205
228
HKCKFCEYETAEQGLLNRHLLAVH
ENSRNOP00000068521
C2H2 ZF
234
256
HICVECGKGFRHPSELKKHMRIH
ENSRNOP00000068521
C2H2 ZF
262
285
YECQYCEYRSADSSNLKTHVKTKH
ENSRNOP00000068521
C2H2 ZF
291
313
FKCDICLLTFSDTKEVQQHALIH
ENSRNOP00000068521
C2H2 ZF
319
342
HQCLHCDHKSSNSSDLKRHIISVH
ENSRNOP00000068521
C2H2 ZF
348
370
HKCDMCDKGFHRPSELKKHVAAH
ENSRNOP00000068521
C2H2 ZF
376
399
HQCRHCDFKIADPFVLSRHILSVH
ENSRNOP00000068521
C2H2 ZF
405
427
FRCKRCRKGFRQQSELKKHMKTH
ENSRNOP00000068521
C2H2 ZF
433
456
YQCEYCEYSTTDASGFKRHVISIH
ENSRNOP00000068521
C2H2 ZF
462
485
HRCEYCKKGFRRPSEKNQHIMRHH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy