Zfx (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000005624 T108904_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfx
M08100_2.00 		Mus musculus
BBVRSCBVGGCCTV
BAGGCCBVGSYBVV		 ChIP-seq
Mathelier et al.(2014)
MA0146.2 		0.826 0.997
Zfx
M09017_2.00 		Mus musculus
VVSVSBNBBAGGCCBVGSH
DSCBVGGCCTVVNVSBSBB		 Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B 		0.826 0.997
Zfx
M09517_2.00 		Mus musculus
BNAGGCCT
AGGCCTNV		 Misc
Heinz et al.(2010)
mES-Zfx_GSE11431 		0.826 0.997
Zfx
M00788_2.00 		Mus musculus
NRGGCCNNN
NNNGGCCYN		 PBM
Weirauch et al.(2013)
pTH2933 		0.825 0.993
ZFX
M08850_2.00 		Homo sapiens
YBVGGCCTVS
SBAGGCCBVR		 Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A 		0.823 0.997
ZFX
M10098_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFX_01 		0.823 0.997
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000068137 C2H2 ZF 369 391
ENSRNOP00000068137 C2H2 ZF 400 422
ENSRNOP00000068137 C2H2 ZF 432 454
ENSRNOP00000068137 C2H2 ZF 463 486
ENSRNOP00000068137 C2H2 ZF 492 514
ENSRNOP00000068137 C2H2 ZF 520 543
ENSRNOP00000068137 C2H2 ZF 549 571
ENSRNOP00000068137 C2H2 ZF 577 600
ENSRNOP00000068137 C2H2 ZF 606 628
ENSRNOP00000068137 C2H2 ZF 634 657
ENSRNOP00000068137 C2H2 ZF 663 685
ENSRNOP00000068137 C2H2 ZF 691 714
ENSRNOP00000068137 C2H2 ZF 720 743
ENSRNOP00000068277 C2H2 ZF 419 441
ENSRNOP00000068277 C2H2 ZF 450 472
ENSRNOP00000068277 C2H2 ZF 482 504
ENSRNOP00000068277 C2H2 ZF 513 536
ENSRNOP00000068277 C2H2 ZF 542 564
ENSRNOP00000068277 C2H2 ZF 570 593
ENSRNOP00000068277 C2H2 ZF 599 621
ENSRNOP00000068277 C2H2 ZF 627 650
ENSRNOP00000068277 C2H2 ZF 656 678
ENSRNOP00000068277 C2H2 ZF 684 707
ENSRNOP00000068277 C2H2 ZF 713 735
ENSRNOP00000068277 C2H2 ZF 741 764
ENSRNOP00000068277 C2H2 ZF 770 793
ENSRNOP00000068521 C2H2 ZF 111 133
ENSRNOP00000068521 C2H2 ZF 142 164
ENSRNOP00000068521 C2H2 ZF 174 196
ENSRNOP00000068521 C2H2 ZF 205 228
ENSRNOP00000068521 C2H2 ZF 234 256
ENSRNOP00000068521 C2H2 ZF 262 285
ENSRNOP00000068521 C2H2 ZF 291 313
ENSRNOP00000068521 C2H2 ZF 319 342
ENSRNOP00000068521 C2H2 ZF 348 370
ENSRNOP00000068521 C2H2 ZF 376 399
ENSRNOP00000068521 C2H2 ZF 405 427
ENSRNOP00000068521 C2H2 ZF 433 456
ENSRNOP00000068521 C2H2 ZF 462 485

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

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41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action