Zbtb49 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000005633 T108905_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription coactivator binding activity. Predicted to be involved in negative regulation of cell population proliferation; positive regulation of transcription by RNA polymerase II; and regulation of cell cycle. Predicted to be located in cytosol; microtubule cytoskeleton; and nucleus. Predicted to be active in nucleoplasm. Orthologous to human ZBTB49 (zinc finger and BTB domain containing 49). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB49
M02901_2.00
Homo sapiens
TTYYGCYTGRCVBGTCA

TGACVBGYCARGCRRAA
SELEX
Jolma et al.(2013)
ZBTB49_1
0.811 0.963
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000042665 C2H2 ZF 388 410
ENSRNOP00000068611 C2H2 ZF 388 410
ENSRNOP00000068611 C2H2 ZF 416 438
ENSRNOP00000068611 C2H2 ZF 444 466
ENSRNOP00000068611 C2H2 ZF 472 494
ENSRNOP00000068611 C2H2 ZF 500 522
ENSRNOP00000068611 C2H2 ZF 528 550
ENSRNOP00000068611 C2H2 ZF 556 578

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action